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54-1346-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288775 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1346-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA NAGCACGTGC ACCAGAGCCG TCGTCACGGG 
    AGTCTTCCAT GTGCACACTT GTTCCATCCA TTTCCAAACA GACAGCGCAC 
    CGGAGAACAC TGTCGTGAAC CTATTGAAGT TGGCTTTGCT TCTCCTCATG 
    CNTGAACAGC TGACTTTTCC AATCTGTCAA ATAGTCAACC ACTTCCCGTC 
    TCAGCGGTGG CTCGGACCGG CCTAAACGAA CAATAATTAT GTTGATAGCC 
    TGCATCTTAA GAGCTTCCTG TTGGTTTGTG GATAAGGGTA GTATGTAATG 
    CATTTTAGGC AGGAGAGGTT TTGTGTATTT CATCAGCATA CTGGAGACCG 
    ATGTGCAGGT GAATCTCACC GCTAAGTGAA GCTCTCCTCT TTTCTTAAGA 
    CCAGTAGGTT GTAGAACAAG TAAAGGGTAA GCGTGCGTGT ACACACGGCC 
    CGTCTGAAGA GTCGAGAGTC TAATGCGGAC TTTCCCAATC GGCTGATCTC 
    TCTTGTTTCC GCCATCTCCT GCTGCGAAAT GAGCGTTGTC TAAGACGCAG 
    ATGGTTAAAA CCGTTGCAGG ATCAAAAACC TCCCATGTGT ATTGCTCATT 
    GTACTTTGGA TTCATGCTGT TGATCACAGT TCGTGATCGA ACCCATTTGT 
    GACCGTATTT TGGCAACAAC GTACGTGTCC GAAGTACCTT TNCCTTTCCC 
    GAGTTTTCAT CGAATGAAAC ACATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288831 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1346-1 - 3-prime edge 
    CACTATGCTT GTGACGTTCC CGGAGATGAT TTTGCCGACT GTGTTTCTGT 
    ATATGGCTGT GATTGGGATG TGGAATTACA GGTTTAAGCC TAGATTTCCT 
    CCTCATATGG ACGCCAAACT ATCTTATGCA GACAATGTAA ATTCTGATGA 
    GCTTGACGAA GAGTTTGATA CCTTCCCGAC CGTAAGGGCT CCGGACATTG 
    TGAAAATGAG GTAACAAAAA TCAAGAATGA TCAAAGAAAA TCGAAAACGA 
    AGAAAGACTT GGTCATTGGT TGATAGTTTT CCTCCCTCAT ATTTTTCAGG 
    TACGACCGGC TGAGATCTGT GGCCGGGAAG GTACAGTCGG TGGCTGGAGA 
    CATAGCCGCA CAAGGAGAGC GAGTGCAAGC GTTGCTG

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR