1. Home
  2. Mutant Lines
  3. 54-1381-1

54-1381-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 125100 [Map]; Strand: c
      • AT4G00290.1 - [+] show detail - Mechanosensitive ion channel protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-1381-1 - 3-prime edge 
    ATTCAGATTT GGAGCTGAAA GCTCGTGCGT ACGAAGAATG GCCTAAGTAA 
    TTGAAAGGCT TAGCATCATT ATGCAGGCGT ATATTCGATG AAAAGGAGAT 
    CATCGAAGGA GAAGCTTTTG GTCCATCAAG AAGGTTTCCA CAAGTAAAGG 
    CCCTGGCATG AGAGTTTAGG AGACCAGAAC ACGATTTTGG AGTGGCATGA 
    GGTTTAGAAG ACGAGTTTAT TGATCTTTGA ATTGACTTGA GAAGCGATAA 
    CCTAACTCCG GCCNTTGATC TACAAATC

AT4G00290.1

Model type
Protein coding
Short Description
Mechanosensitive ion channel protein
Computational Description
Mechanosensitive ion channel protein; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS, transmembrane-2 (InterPro:IPR011014), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00234.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR