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Mutant Lines
54-1382-1

54-1382-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26464630 [Map]; Strand: c
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 499; Region: intergenic
  - AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -1542; Region: intergenic
Flanking Genome Sequence: 54-1382-1 - 5-prime edge
```
GTGTCTATGA AAGGATTTAC AAGATGGGGC AGAGTTAAAG GACTTGTCCT 
AAGGATTTGT TGCATACTTA ATGAATAGAG AATGCGGGTC ATTGTCTTTA 
CTGACCTCGT TTGATGATTT TCACATGGTC ACATGTGCAA GAATTCACCA 
ATATAATCTC ACATAACTTT TAGCGAGCAT CTGTATATAC ACAATTAAAC 
CTTATTTATA CATTTCATTG CCTTGTTAAA ACATTTGAGC CGACTCACCG 
GCCAATACCA AAATTGAAAG AGATGCATAA TAAGTATNAT CTAC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26464746 [Map]; Strand: c
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 615; Region: intergenic
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -1426; Region: intergenic

ATAGACACAA CTCTTCCCTT GCCCATTCTA TATAAGTATC AAGTATGCAT 
ATATCTACTT GTATATGTTT TTGTGACTGT TTTATTTTCT GGAAAAATGA 
GCCACCTAAC AAATAAAAAT GCTTTAAATG GGCTATTTGA ATGCGAATGA 
GACCATCTCC ATTGGAAGTA TCTCATAAGA GTTTCTCACA ATTAAAAAAA 
TAAAAATAAT GAAAATAAAG GAGAGAGAGT GTATAAAGTT TCTCACTTGA 
GAAACTCTGA GATACTCTCT ACAACCCATC ACGACAATTC TCATCTTACT 
ATTGGTTCAA TTTTTTAACA AAAATACTTT TTTAATCAAA TAATCAAATT 
ATAATATAAT ATTAATATTT TTTTTTTNGA AAAACTTTGG GGGTTTCTNA 
NGGANGGANA TNCCCTTAAA ANGTCCCNAC CNTGTTNTAA ACNCNCNCNT 
TAAANGTNCC NTTCACCAAA ACTTAAACTN GACCANCCTT AAANGGATTT 
TATATNTTTG ATATTGGAAC TTGAAAGTCT CATCACTTAN AGATGGNNCT 
AATAAAATAT GCAAAAGACA AGACTAATTG ACAATAAAAC TGCNCCTCCC 
TTGGATTATA ATTANATTCT CGGGTTAAAT AAAACCCCCC CATGCNACAG 
CTGAAAAGGA AGGAAACCCT TAATCNTCAA ANCAGCTTGN AATNAAAACC 
AAAAACTCTG GCNCCGGAGG G

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link: InterPro Scan - TAIR