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54-1401-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26471305 [Map]; Strand: c
      • AT5G66260.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1401-2 - 5-prime edge 
    TTTGGGGACG CCGTAGAAGT TAACGTCGAC GCTGCTCTTC TTCCCTAAAC 
    TCGAACATCT CTTTAACATC TGCTTCAGAC CCTTACCACT TCCCCTTTCT 
    ACTCCCATTG ATCTCTAATA TCTTTTTCTT CTTTTGCCTC ACTGTGTCTN 
    TGCTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26471377 [Map]; Strand: c
      • AT5G66260.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1401-2 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATATTAT 
    TAGGTCACTT CGTCGTCTAC GTTGGTCACT CTAGATCCCG ACATGTCATC 
    CCCATCTCCT TCCTCACGCA CCCCATCTTC CAGGTATATA CATAAACATG 
    GATCTTGTTG GTCTCATTTA TTGCATCTAT TTATGTGATA TACATATATA 
    AATCTATTAT ATTCATGAAA CAGATGTTGC TNGCGACAGT CTGAGGAAGA 
    GTTTGGGTTC TTTCAAGACA ATGGCCTAAC CATCCCTTGT GATGAACACT 
    TCTTTCGAGC TCTCATTTCC TCCATTAATC CTTAACGAGA CAAATTGAAG 
    AAGATCATAT ATGTACCTAC TTGCATGTGT TATGTGTATA TCTTTTCTTC 
    CTAAATTAAT TAGTTCTCTC ATGTATTAAT AGTGCATCGA TATCATGTCC 
    TTTGAGAGTT GTAGAGTTCA CGTTACGTAC GTATACTTTT GTTTCAACCT 
    CATTTTCTTG GGNTATTTNT AAAAACCCCN CANCGNNANN TNNNTTNNNN 
    GGGAGAAGAA ANCTNNCNNN GGGGNGNNNN NNNNAANTNN NNNNAANGNG 
    NNNNNNNNAN AANNNNNNNN ANNNNNNANN GGNCCCCCG

AT5G66260.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR