1. Home
  2. Mutant Lines
  3. 54-1418-2

54-1418-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26464918 [Map]; Strand: w
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 787; Region: intergenic
      • AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -1254; Region: intergenic
    Flanking Genome Sequence: 54-1418-2 - 3-prime edge 
    GGGTTGTAGA GAGTATCTCA GAGTTTCTCA AGTGAGAAAC TTTATACACT 
    CTCTCTCCTT TATTTTCATT ATTTTTATTT TTTTAATTGT GAGAAACTCT 
    TATGAGATAC TTCCAATGGA GATGGTCTCA TTCGCATTCA AATAGCCCAT 
    TTAAAGCATT TTTATTTGTT AGGTGGCTCA TTTTTCCAGA AAATAAAACA 
    GTCACAAAAA CATATACAAG TAGATATATG CATACTTGAT ACTTATATAG 
    AATGGGCAAG GGAAGAGTTG TGTCTATGAA AGGATTTACA AGATGGGGCA 
    GAGTTAAAGG ACTTGTCCTA AGGATTTGTT GCATACTTAA TGAATAGAGA 
    ATGCGGGTCA TTGTCTTTAC TGACCTCGTT TGATGATTTT CACATGGTCA 
    CATGTGCAAG AATTCACCAA TATAATCTCA CA

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66240.3

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link
InterPro Scan - TAIR