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54-1419-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22339174 [Map]; Strand: c
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 54-1419-1 - 5-prime edge 
    NTNCCATCGG GNAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG 
    GGATTTTCCC ATCCTACTTT CATCCCATGA TCATCCGGAA CATCATTGAC 
    TTAAGCAGAA GTTTGGTCTG TGGTGCTCAA GGAATGGTAC TTGATTCCAC 
    ATTGACTAAG ACTTGTGATC ACCTCAAAGT CTCCAGCTTT AGTAGACCCA 
    TCTTTACTCG ACACCTGTCT TCTCAATTCA GCACAACCAC AATACTCTAC 
    GTCGTACACA TGTACGCCTT TAAAGGTTGC AAATGTAGTC CTTACTCCTT 
    CCCCTGCATT TTCTCAACAA AGAGACATTC AAACACAAAA TTTGATCGAT 
    AAAAGGGACT ATTCATAGAC TCTTTGCTTT AATAAAACCT TAGAAGAAGA 
    TGTTCTCTCC AGAGAAACAA AGCAGAAAGA ATGTGTAAAA GATCCAAAAA 
    GACTTAAGAA CATAATGTTT TTGTTTACCG TGAGTGACCA AGAGCAAGTT 
    CTCTGAAGGA TACTTATCAG CAAGAGTCTT TATCAAACTA AGAAATCTAT 
    CTGTGCAGCC TTCCACAGTC TCTTCCCATT GTGGCATCTA AACAATGCCA 
    ACAAGAGAAT CAAGTTTAAA CTCAAATTGC TTCGAAGATT AGAAGATAAA 
    CAGAAACAGA ACAAGACAAG TCTAGATACT ACAAAATTCC AAAACCTCAC 
    CTCTTTATAA ACAGGATCTA CACTATGATC AACCATTCCA TCAGGAAAAA 
    TCGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22339176 [Map]; Strand: c
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 54-1419-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CTAGTAAACC GGAATCAAAC CGGATACTGG TTATCTAGAA ACAATTCTGT 
    AGAAGATGAG AACCTTGCCG GAATACTACA ATAGTAGTGT GTTGCTTCCG 
    ACAGATTGGA GATACGGTTT CGAAGAGAGA ATTTCTTTTT AAGTGTTGTA 
    CCNGGCGGTT GAAAATGATT TTGTTGTTTA TTATTGATTC TAAACGTAAT 
    TTTGGGCAGA TACTATTGAT TAAACTGATT TTGCGTTTTT ATTTTTACAA 
    TGTCATGTGT TTTGATGTCT TCTTACTTAC TCTGTCTCCG ACTAACCAAA 
    AGCTGTAAAC AAGACCGGCT CTTCAACAGG AAACATAACC ACCAAGTAGG 
    TTGAGTCTCA TTTAAGAACA AGCCATATGC CACTCCTTGC ACTGCAAAAA 
    GTCTTTTCCT TTTTGCTTCT TCTCTGCAAA AAAATTGTTT TGGAGTGCAA 
    GTACCACCAA AAACTTCGTA CTAGACCATC ATCAGCTACT GGAATCAAAG 
    CAACGATAGA GTTTGAGTAA CCAAATCTGT TTGGGAGTAC CAGAGGTTAA 
    ATATGATCAT TATGATGCTC TCTGCGGAAG ATGCAGCCAG TCCCAACGTC 
    CATTGGACCT TGAAGTCTAT CCAAAGCTCT CATACTAACA TGAAAGAAGA 
    CAGTCTTGTG GTTAGTATAC TTTTGTGGAG CGGATCATAA AATCCATCT

AT3G60440.1

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 262 proteins in 108 species: Archae - 0; Bacteria - 57; Metazoa - 8; Fungi - 71; Plants - 68; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR