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54-1419-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22339098 [Map]; Strand: c
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-1419-2 - 5-prime edge
    CTACCCNCCA GGAACATCNT TGACTTAAGC AGAAGTTTGG TCTGTGGTGC 
    TCAAGGAATG GTACTTGATT CCACATTGAC TAAGACTTGT GATCACCTCA
    AAGTCTCCAG CTTTAGTAGA CCCATCTTTA CTCGACACCT GTCTTCTCAA
    TTCAGCACAA CCACAATACT CTACGTCGTA CACATGTACG CCTTTAAAGG
    TTGCAAATGT NGTCCTTACT CCTTCCCCTG CATTTTCTCA ACAAAGAGAC
    NTTCNAACAC AAAATTTGAT CGATAAAAGG GACTATTCAT AGACTCTTTG
    CTTTAATAAA ACCTTAGAAG AAGAT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22339226 [Map]; Strand: c
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 54-1419-2 - 3-prime edge
    CTAGTAAACC GGAATCAAAC CGGATACTGG TTATCTAGAA ACAATTCTGT 
    AGAAGATGAG AACCTTGCCG GAATACTACA ATAGTAGTGT GTTGCTTCCG
    ACAGATTGGA GATACGGTTT CGAAGAGAGA ATTTCTTTTT AAGTGTTGTA
    CCGGCGGTTG AAAATGATTT TGTTGTTTAT TATTGATTCT AAACGTAATT
    TTGGGCAGAT ACTATTGATT AAACTGATTT TGCGTTTTTA TTTTTACAAT
    GTCATGTGTT TTGATGTCTT CTTACTTACT CTGTCTCCGA CTAACCAAAA
    GCTGTAAACA AGACCGGCTC TTCAACAGGA AACATAACCA CCAAGTAGGT
    TGAGTCTCAT TTAAGAATAA

AT3G60440.1

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 262 proteins in 108 species: Archae - 0; Bacteria - 57; Metazoa - 8; Fungi - 71; Plants - 68; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR