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Mutant Lines
54-1425-1

54-1425-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 55507 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -2058; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 1692; Region: intergenic

GGGNNAAACT AACAAAATCC GGTTATACGA TAACGGTNGG NACNGGTATT 
TNCCCATCCT ACTTTCATCA ATNGGAATTA TACNAACGTA GCCATGTTGA 
TATTGTCCAA AATGCANTGT TCGATNTTGC GCGTTAAATG TATATGTATA 
TAATTCCAAA TTTCCAACAN TTGGNNTATA AACGATGGTA CCTAACATAA 
CCTCATATAT TGTGATACAA CGAAAGGCAC CGGATGGTGG AACGCATCAC 
GCATCATGCA TCCTCGATCC CTTTTCAAAG TGGTATGTAA GAGATCATTA 
TTTCAACATA ACATACATTT GCTATGATGA CGCATTTTAG TCAAATTAGT 
TGTTTGTTCA ATCATATTAA TAAGGGTCAA CAGATATTTA TACGAACTGT 
AATTAAAATG ATAAAATCCA AAGCGACAAG TTTGCTACTA CCAAATGTGT 
GTTTAATATA TATAATTTAG AAACATTGAA TTTGAGAAAA TGAGTATACG 
GTTGCACAAA AGAAGAAGAA GAAGAGGAGT ATACCAACAA AAGGTTGTAC 
GTAATATAAT TCCGACCCCC TAAAAAGATA TATAATAAGG TGGAGAGCGA 
GGGATCTGAA ATTGATGGGT GTGTTTTTGT GTGCATAACA AAAGTTAAAA 
ATGNATTNAT ATTATTTTTA ATTTTAAAAT TCTTTTCTTA CTTGNGTTTA 
TTTATTAGTT AAATAAATAA TTTAATGANA NAAGCTNCAN NCCGGGCCGN 
NNACCNNCGN NCNCNTTN

3 prime edge [+] show sequence

Chromosome: 4; Position: 55496 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -2047; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 1703; Region: intergenic

ATTAAAACGG TAGAGGTATT TTACTGACCG TTACCGACCG TGGGCATATA 
ATTCCAAATT TAACAACTAA TATTAAAATA CTTGAAAAAC AGTGGGATGA 
TGGAAGACAG ATGTGAGTTA AAGTCTGATT ATAACAAAAT CAAAATCTTC 
CTAACTCCTA GGAGAGTCTT CTTTGAGACA AAAGTACATA TGCNGGTGTC 
TAAAAGGAGT AAAAGAAAAA TGATAACTCA ATTAGTTGAA GGACAAATAA 
CACCAAAAGC TGCGTATTTT ATCATCATTT TACTTTTTGT AAGCAATGAA 
TAGAAAAAAG CAATGAATAG CCTGTTGTTA TTCATTTCTT AATGACATGT 
CACACATACA ATATAGTGAA AGATGAAACC CAGCAAACAA AAAAAAANGG 
AANANAANGT TGGATNNCTT NNTAATNNGT NTTNCCCNGT CCNTATNTTN 
TNAAAAGTTT NCTTCNANGN GNGATNAGCC CCGNNTNCCC CNNGGCANCA 
TAGGCNTTNG NTANGGGTTA AAANCTNTTT TNAAAANTAA NTNGGGAAAA 
AATNCTTNAC NCTCNCGTNN GTNTNTTAAA NGATGGANTN CGTGAGNGTA 
AAGTAAAGTA GTCCTAANAG TNTTTATNAG GGATGGATTN CATNANTTTT 
AATTCTAATA GTTTTNGCTA NACCTCGCCT GGACCGGNNA NTGTTTNTAC 
TTACTGCGCT NATNAAACGG TTACCATTTG AATCTANACA TGTGATNTAN 
GATGAGGGAC TACTTCGGCC

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR