1. Home
  2. Mutant Lines
  3. 54-1432-3

54-1432-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26555384 [Map]; Strand: w
      • AT5G66530.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G66530.2 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1432-3 - 5-prime edge
    TCTGATANTC CGCTAANTTT TGGCAAATTG CCTTCTCCTT CAGCGACTCT 
    CACTCCANTA GTTGAAGAAN CCATGGCAGA GAATCTTCTT CTGCAATATC
    CAAGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26555253 [Map]; Strand: w
      • AT5G66530.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT5G66530.2 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-1432-3 - 3-prime edge
    AGGTATCAAA AACTATTGAC CATCTCATAC TAAGTAAGTC AGGTTCAGCT 
    TTATGTCATC TGGGTTGATT TATAATTGGA TGCAGCGAGG CTGAGATATA
    TCTCTTCGGA GGCTGCATTA CTTCTTGGAA AGTTGCGAGC GGTAAAGATC
    TTCTTTTTGT CAGACCAGAT GCTGTCTTCA ATAAGATTAA GCCCATTAGG
    TATGTGTGTG TGAACTTCAA CAATTGTTGT TAAACCAGAT AAAATTGTGA
    GTAATGTCTT TTCTTTTTTT CGTCATACTG TTTGTTATTG GATTAGCGGA
    GGGATTCCAC ATTGTTTTCC ACAGTTTGGA CCTGGGCTAA TTCAACAGGT
    ACTCTCATTT ACTGTTTCCT CGCTTGATCA AATCTCTTTT TAGTTGTTTA
    TGCTTATTTG GTGGTCTTG

AT5G66530.1

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66530.2

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1).
Link
InterPro Scan - TAIR