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Mutant Lines
54-1435-1

54-1435-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19600044 [Map]; Strand: w
- AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: exon1 (CDS)
- AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: exon1 (CDS)

GATCCAATGG GTGTTGTTAC TGTTCCTGAG TCTAATAAGC AAAGTGTTGC 
TGCTAAAAGA GCAGTTTCGT CCAAGTTCCA GTATCAGACA CACTCCTCAA 
TGGTACTCTT TCACTAACTC ATCTCTTCTT TCCTCAAAGT GTTGCTGATC 
TCTCTGTTGT TCCAGGCCTG TCTCGGACGT TACGAGTGAC TTAACCATTG 
AAGTCGGCTC TGCGACCTTT TCCCTTCACA AGGTAACCAA ATTCAATAAA 
CTCAGAAGAA AAAAGAGAAA CTGCTTTACA CAAACTCGTT CTCTTTTGCA 
GTTTCCTCTC GTCTCTCGGA GTGGAAGAAT CCGGAAACTT GTTCTGGAAT 
CAAAAGACAC GAACCTGAAC CTAGCCGCTG TTCCAGGCGG CTCANAATCG 
TTCGAGCTTG CTGCAAAGTT CTGCTACGGC GTTGGCGTCC AATATAACTC 
GTNCAACATT GCGGNGCTGC NATGCGTGGC TCATTACCTG GAGATGACAG 
AAGACTTGTC NNANAANAAC CTNNACNANG GNNNNNNAA

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 19599928 [Map]; Strand: w
  - AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -20; Region: promoter
  - AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -20; Region: promoter
  - AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -51; Region: promoter
Flanking Genome Sequence: 54-1435-1 - 3-prime edge
```
ATTGGATCTT ATTATTATCT ATCTCTTCTC CCCAAATAAA GTTGTAAACC 
TCTTTTTGTG TTACTGCAAA TATGTTTTTG TGTTTCTCCC AAAAATGTTC 
CTTACTGTCG GCTGCAAATG CTCTCTCTCT CTGTCTGCTT TTCAAATATG 
AAAGATTGTG CCATGGAGTG AGAGTTAAAA ACACACATGA ATT
```

AT2G47860.1

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 884 Blast hits to 856 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.2

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.3

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1).
Link: InterPro Scan - TAIR