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54-1474-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 84093 [Map]; Strand: c
      • AT2G01110.1 - [+] show detail - Sec-independent periplasmic protein translocase
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1474-1 - 5-prime edge 
    TACTAGAATC TCTGTGGTCT ATCGACCAGT ACTTTGAGTT TGTACTAGTG 
    CTTATGTTCA GCACAGGCCT TTCTTTCCAG GTATGTGGCA ATATGATATT 
    ATACATGTTC CTAAACGTTG CTTTAGCCAT CTTCACCTGG AATTTTGGCT 
    GCTTCTTGTT GGTTTCCAGG TTCCAGTCAT TCAGTTACTC CTGGGACAAG 
    TAGGGGTTGT GTCGGGAGAT CAAATGCTAT CAATTTGGAG AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 84205 [Map]; Strand: c
      • AT2G01110.1 - [+] show detail - Sec-independent periplasmic protein translocase
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1474-1 - 3-prime edge 
    ATCATTCTAC CACACCTTCA GCGTAATTCA CAAAGAAATT CAAGGCTGCA 
    GGGGTTAAAA CCCAGTAGGA GAAAGCAAGT CCAGCATAGA AGAGCAATGA 
    GGAGCCAAAT ACAATTGGCC CCAGAAACCT TCTCTCAGCC CGTGTCAGAC 
    CGGGAAGGAC AAAAGCTATA ATCTCATACA GGATCACTGG GCTCCCTAGT 
    AGAAGCCCGC AATAACCGGA GACCTGCACC GCAACACAAG AAAAAGAAAA 
    TCATCTATCT TGAATATGAT GCTATCTGTC GTCAATCTGA TCATTACCTT 
    TAAAGTTGTG AAGAATAATC

AT2G01110.1

Model type
Protein coding
Short Description
Sec-independent periplasmic protein translocase
Curator Summary
mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.
Computational Description
ALBINO AND PALE GREEN 2 (APG2); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: thylakoid membrane organization, double fertilization forming a zygote and endosperm; LOCATED IN: chloroplast thylakoid membrane, receptor complex, chloroplast, integral to thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec-independent periplasmic protein translocase (InterPro:IPR002033), Sec-independent periplasmic protein translocase, conserved site (InterPro:IPR019820), Twin arginine-targeting protein translocase, TatC (InterPro:IPR019822); Has 5953 Blast hits to 5918 proteins in 1859 species: Archae - 177; Bacteria - 3492; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2203 (source: NCBI BLink).
Link
InterPro Scan - TAIR