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54-1491-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10314888 [Map]; Strand: c
      • AT2G24250.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G24250.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1491-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT AGCGGCTACG 
    AAAGGGCTCT GAAGAATCTG CAGGAAGCTC CAACTTTTTC TCCAAGTTAC
    GGTACTACTA CGACCTATCT CTTTAATCCC TGCGAATATT CTATAATGAA
    CTGTGAATTT TCTGTATACC AACTTTTAGT TTTTCCTGTG GCAAATTGAT
    CAAACCCAGA ATTGATTATG ACCTTTGGAG CTTCAGTGAA ATCAATTTTT
    TCCTGTTGGG TTTTATTTTC CAAGAATGAA CTGAGAATTT TCTAAAAATG
    GAAGAGTTGG ATCGTTTCAG CAATTTCATC AAACCCCTAA AAAAAAGTTG
    TAAATTTTCG AAATTGCAGC AGTAAATTTC TGTGTTCTTC AGCAGCAAGC
    ATGGCAATGA AAAAGAAGAT ATCAACATCA TCGATAATGC CAGACTGGTC
    TCAGCTTCCT GAAGAGCTAC TTCACATTAT CTCAACGCAT CTAGAGGATC
    ACTATTTCGA TGCTGTTCAT GCCCGCTCTG TTTGCCGCTC ATGGCGATCC
    ACATTTCCAT TTCCTTCTTC TCTATTACGC CAAAGTTACT CTCTTCCCGC
    TTTCCCTTTA GAAAGCAAAG ACTTGTGCTG CACCCTGGAG AAGGTCCCTT
    TGTTCCTCTT TAGAGTTCTA ACTCCTCCTG ATGCTGCTGA TGCTTCCTCC
    GAATATTTTC TGGGAGGATT AGGCCAAGAT AAGTCAAATG ATCATGTGGA
    GCTTCCATCT CCTCTTCAGT GCTCAGG
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10314917 [Map]; Strand: c
      • AT2G24250.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -7; Region: promoter
      • AT2G24250.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1491-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CGTCGACAAA TGGGGATAGA GACTAGTTAA GATTTAGAGC GAATTTGGTT
    TGGGGTTGGA TTGATTGGGA AAGCAAAGAA CCGAAGGGAT TGAGACGGTT
    TATATCACAT GAGCCGGTTA AGACTTTGGT TTTCGGATAG ACTTGAGATG
    ACGTCGTTTT TGCATTATGT TGTTGTTATG TTTCTTTTCT TCGTTCTGTT
    GATTGTTTTG TACTCTTGTT TCTCTCCTCT GTACCCAAGA ATATTTTTGA
    TACTGATTTG CCAAGAGGTA TCTTCGATCG GTTTGAATCT TAGGAACTCG
    TAAAGTGATG TGAGTTCTTG TTTTTGGAAC GGTTAATAAA CGCTAGTACG
    CAACATTAAT GAAATAACAC AGAGCTTGGT AACCCCATCA ATGAAACTCC
    CAGGCTAACT ATAGAAGTAA GTTTCATTTT CCTTTAAAGA TGATTTCAAG
    AACTTAGCTT TAGCTTTTGG AAGGAATTTT CTTTTCTCAT TGACACTCTC
    TGGGAAAGTT CTGGCGTAAC AGTATTAGTA TGTGAGCTAC CACAGTGGAT
    ATGCTCTGAT CTTTAAAGAA TCTAGTTCAC TTCTTTTCAT CACTTTGAAA
    AAACAAATGT CTACCCTCTC TATTCCACTT AAAAGCTATA TTCTCATTCA
    AAATGACATC GGTATAATAT GTTAAAAAGA TGGAAAAGCT AACTTAAACG
    TCGAGAAAAT CAAAGACTCN

AT2G24250.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 154 Blast hits to 151 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G24250.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR