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Mutant Lines
54-1509-1

54-1509-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 27440508 [Map]; Strand: w
- AT1G72930.2 - [+] show detail - toll/interleukin-1 receptor-like
  Distance: 44; Region: intergenic
- AT1G72940.1 - [+] show detail - Toll-Interleukin-Resistance (TIR) domain-containing protein
  Distance: -1730; Region: intergenic

GTTNGGATTG ATACACACAT GAAGGAACTA AACCGATTAA TGCATATGAA 
TTGCAACAAA GTTACTGTAA GAATGGTTGG TATTTGGGCA AGAGGAGATC 
GGCTTTAGCT AAATATGTTT ATCAGACATC TTGTCAACAG TTTGACAGCC 
ATTGTTTTCT TGGAAACGTG AAAACGATTT CTCTACCAAG TGTCGTTAGC 
TCAATTGGTA AAGACCTTAA GCGAAGTTTT CGCTTAGGGT CGCCGGTTCG 
AGTGACGCTT GANACNAAAC TAATATTACA TGATGTGGTT TCGGGCCTGG 
GTAGATTACG GGTTTCGCTC ACAAACTTCC TG

3 prime edge [+] show sequence

Chromosome: 1; Position: 27440459 [Map]; Strand: w
- AT1G72930.1 - [+] show detail - toll/interleukin-1 receptor-like
  Distance: 0; Region: exon2 (3UTR)
- AT1G72930.2 - [+] show detail - toll/interleukin-1 receptor-like
  Distance: 0; Region: exon2 (3UTR)

ATCCCAACTA GATTCTTCCC ATTGTTTATT GTAATGGTCC CTCTTCAAAG 
CCAAAGAGAA TTCTAGTTCT TAAAATTGAT AAACGATTGT TAGTTAAGAC 
TACCTTTTGT TTTGTTTTTC ATTGATATAA ATACTTGGAG TACACCTCCT 
TACAACTGGA AACAACATGG AAACNAACGT GGAGTAACAA CTCCTACAAA 
CTTGGAAAAG ATGGAAACTG GAATCGTGGA AGACTCCTTG CTTATTGTAA 
CTAAATCGAA AACAAAGACT AAGTCAAATG ACTTAGTGTT GGACATACTT 
TGGATTGGGC CTGCGAGTCC TTATGGGCCT TCTCCTTTCT TCTTCTTCNT 
CTCACTCG

AT1G72930.1

Model type: Protein coding
Short Description: toll/interleukin-1 receptor-like
Curator Summary: Toll/interleukin-1 receptor-like protein (TIR) mRNA,
Computational Description: toll/interleukin-1 receptor-like (TIR); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72910.1); Has 1768 Blast hits to 1683 proteins in 89 species: Archae - 0; Bacteria - 94; Metazoa - 0; Fungi - 0; Plants - 1674; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72930.2

Model type: Protein coding
Short Description: toll/interleukin-1 receptor-like
Curator Summary: Toll/interleukin-1 receptor-like protein (TIR) mRNA,
Computational Description: toll/interleukin-1 receptor-like (TIR); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain-containing protein (TAIR:AT1G72910.1); Has 1753 Blast hits to 1671 proteins in 89 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 1658; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72940.1

Model type: Protein coding
Short Description: Toll-Interleukin-Resistance (TIR) domain-containing protein
Computational Description: Toll-Interleukin-Resistance (TIR) domain-containing protein; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS class) (TAIR:AT1G72950.1); Has 4863 Blast hits to 4729 proteins in 156 species: Archae - 0; Bacteria - 30; Metazoa - 0; Fungi - 0; Plants - 4833; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR