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54-1529-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 474945 [Map]; Strand: c
      • AT2G02010.1 - [+] show detail - glutamate decarboxylase 4
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 54-1529-1 - 3-prime edge 
    ATGTTAGGAA CGTTTAATTC AAAGTATAGT AACAAGTAAC AACTTAAATA 
    TAATACATTC TAGTTTCTTT ATTGACCATT TGGTAAATAT ATTGCTATTT 
    TGAGTTATTA TTTACCTCGA ATCCAAGACG AATCAGCCTG GTAGTACTTG 
    AGCAATCACC TTGACTTGAA CCTGGTTTAT ACAAGCATTA TCAAATGTTT 
    AGTCTATAAA ACAATTCCAT ACACCAAAAA TATTATTGAA AGTTATATAT 
    GTTATGGACT TATGGTAATG TACCTTTGGA GAAGTTGAGT GTAAAGGTTG 
    GTTGATCAGC GCCAAGATAA TTGATATGGA AGATAAGTTC ATCAGGCAAG 
    TCGGTTTTGG TTCTCCATAC AACCCAACCA ATACCGGCGT AAACCAAACC 
    GTATTTGTGA CCACTCACAT TAATACTCTT AACCAACGGT AGCCGGAAAT 
    CCCACTCCAG GTCCGGATAC AAGAACGGAG CAATAAACCC ACCACTCGCT 
    GCGTCCACGT GTATTGGCGT GTCCCATCTG CNAATTGNGT TTTANAACGT 
    TAAAACCNGA CTCCNNACCN GNTNCNATCN ATNTTANCNT GGNNNNNNGG 
    GNGGG

AT2G02010.1

Model type
Protein coding
Short Description
glutamate decarboxylase 4
Computational Description
glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).
Link
InterPro Scan - TAIR