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54-1536-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1593587 [Map]; Strand: c
      • AT4G03570.1 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1536-1 - 5-prime edge
    GGGAAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ACAGAGACCA TCTCTTCCCA ATATGCGCTT
    ACTGATAAAG ACTTTCGCGC ATACTGGGAA GACATGGTCT ATGTTTGTCT
    CCAAAAACTC AACCAAGACA AGGTTAGTTC TTTCTCCTTT TCCTGCATAC
    TAGTGTAGAT GGGTATAGCT CATAAGTCTG AATCAAGAAT ACTAACTAAA
    GGTCTAGCTG TTAGAGAGGT CTGGATTGGT ATTTTGTCTG AGCTTGAGGA
    TTCAGTCTCT TAGGTGTTAA CAGTAGCAAT GGTTAGGTTG ACAGGCTTCT
    TAGAAGTTGT GTTCTGGCTA TTGTTTAAGA ATTTTCAACG CTGAAAAGTA
    TTCAACGCAA ACTTGGCATT AACATTATCA TTCCTTTCTT ATTGTGGTTG
    TAGGAATCGA ATGTGGAGTT GGTTGAAATT GTGAGAGGTT ATTATCGCGC
    AGGACCGAGA TCAAAGTCAT ACATTACATT TATGGCGAGG GAGAAACCGG
    ATGGACCTCT TGTGGAGTAT CAAGCCAAGT GTATGGTTAC TTTAGACAGA
    AAGAGGCATC CCATTCTCTG TAGACCGGCT CCTACACCAA AGCCTTAAAA
    CCAAACTAAT GGTAGTTCGG ATTTGCTGTG TCCATGCTCA AACATGATTA
    GATATATATC TGTTGGAATT GAGAATCCTA GATTAAATCC TGCAAGAAGT
    AAAGCTACCA NCCANGGCCG NNGN
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1593641 [Map]; Strand: c
      • AT4G03570.1 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1536-1 - 3-prime edge
    TTTATACCTC TGTAAACCCA TTGGTTTTAT ACCTATGTAA TGATCAAAGG 
    GCTTAAGCAG CTGGATC

AT4G03570.1

Model type
Protein coding
Short Description
Cystatin/monellin superfamily protein
Computational Description
Cystatin/monellin superfamily protein; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03590.1); Has 92 Blast hits to 82 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR