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54-1551-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 289338 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G00710.1 - [+] show detail - BR-signaling kinase 3
        Distance: -710; Region: promoter
    Flanking Genome Sequence: 54-1551-1 - 5-prime edge
    CAANTAGCAT GTTTGTTGAT TACTCTATCC AGAANAAGAT TCACAGCATA 
    GAGTCGGTCA TGGCTGGAAG TCGCCGGAAA AAGTTGACGG GAGCGGAGGG
    AATGCGGTGT CGGAGCTTTG GATGTCGCAT GAAGTANTAG CCGGATAAGA
    GAGCGACAAG TTTAAAAGGG GTAATGTANA GAGCCATGGC AATAATGAAA
    CAGAACGTCA CGAATATTGC GGTGGCGCGT GGATCACGCC AGCTCAGCAA
    CGCTTGCACT CGCTCTCCTT GTGCGGCTAT GTCTCCAGCC ACCGACTGTA
    CCTTCCCGGC CACAGATCTC AGCCGGTCGT ACCTGAAAAA TATGAGGGAG
    GAAAACTATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 143576 [Map]; Strand: w
      • AT4G00330.1 - [+] show detail - calmodulin-binding receptor-like cytoplasmic kinase 2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-1551-1 - 3-prime edge
    ACTACTATCT TCTTTTTGTA TATATTCATT TCAAGCTAAT CGATCAATGT 
    GAATCTGTTT GTAGGTAAGG AAGGAAAGAC TCTCGACATG GCGACTCGGT
    TAGATATCGC AACCGATGTA GCTCATGCCA TAACCTATCT TCACATGTAT
    ACACCGTAAG TCCATTGTAT ACATAGGTTC CTTCTTTTTC TTTCATGGCA
    ATAGTACTTG TTCCTTGACA CATTTGTTTT GGATATGTTA TAGAGCCACC
    TATCATCCAC AGAGATATCA AATCTTCAAA CATTCTCCTC ACTGAGAATA
    A

AT4G00330.1

Model type
Protein coding
Short Description
calmodulin-binding receptor-like cytoplasmic kinase 2
Curator Summary
high overall homology to CRCK1
Computational Description
calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 1 (TAIR:AT5G58940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00710.1

Model type
Protein coding
Short Description
BR-signaling kinase 3
Curator Summary
Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
Computational Description
BR-signaling kinase 3 (BSK3); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT1G01740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR