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Mutant Lines
54-1588-1

54-1588-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 19681663 [Map]; Strand: w
- AT5G48550.2 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: 1103; Region: intergenic
- AT5G48560.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -2343; Region: intergenic

CTGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA TTGACGAATC TTTTTTTTTC TAATGAAAAT 
TTATTCTTAA CAATATTTAA TTTATTTGAT ATCAACTTGA AAATAAATTT 
ATAAGCCTTC GNGAATTCTC ACAGCATATC ACGACCACCT TGAAATTTGA 
TTTTTCTTAC ATTTTTTAAT ATATGATATC GCATAAGANA GAGAACCTGT 
AAGCTGNAAC NGTTGTTTTA TTCTTGGNCA AGNGNGTATT TAGNGGTTAT 
GTAAAGAGGG NATATAGTCG TATAGAATAC GTTATTGNAT TTGNATATGN 
GAATGATCCA AACTATACTA ATTTAAAAAG GGNTAGTTTA TATATGTATC 
CATCTTTTGT CGAGGATTAT ATGTATCTAG TTNGGACTTA ACATTTACAA 
ACCAGAATAT TTACAAACAG NGAAAAAGTC ATTCTATAAT AAAACATGCT 
CAATTCTTTA TATACTAGAA CATAAACCAA TNTNTNAAGG NACTAATTAA 
CTAAATTATC CTTTCTAGGT GNATGGACCC TAATCNGTNT CCNTNCCNGA 
TTANNCCNCC NNNAAAAATN GCNTGCCNTN NACCTGNTCN NAANNGAGAT 
TGGNGNNAAN TTNNGNGNNC NNTNCTNNAA AGGANAANNA CCCCCNTGNT 
NNANNNGGGG GGGGGGTTTG NNCNNNNNNN NANNNNNNAN T

AT5G48550.2

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: leaf whorl; CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451).
Link: InterPro Scan - TAIR

AT5G48560.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR