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54-1629-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2943064 [Map]; Strand: w
      • AT3G09580.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1629-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATTTA GACAAATAGT GCTCCGAGCT GGTTTTGTTA 
    TAACCGGGTC TCTGATCCCA TCGAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2943056 [Map]; Strand: w
      • AT3G09580.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1629-1 - 3-prime edge 
    TTTGAATACG GNAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTTCACAGCT GAACCGAACC AAATACCGGT ACAAGACCCG GTTCTATTTC 
    TCAACGGGTC AAATTCCGGT ATAATCAACA ACATGTTCTT CGCTACAAAC 
    GTTGCTCGGA CATACGCGCC ACCGGGAAAG GCTCTGGTTT CGGTATCATT 
    GATCGGATTG TTTGAGGATA GAACCGATGA TGATTTAGCA GCAGAAGTTC 
    TTAGAGAACT CTCTGGTTGG TTTGGTGAGT CTCCGGTTAT GTCATGGAAA 
    CATTTGAAAA CATACCGGAT C

AT3G09580.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink).
Link
InterPro Scan - TAIR