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Mutant Lines
54-1648-1

54-1648-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 720586 [Map]; Strand: c
- AT4G01680.2 - [+] show detail - myb domain protein 55
  Distance: -3171; Region: intergenic
- AT4G01690.1 - [+] show detail - Flavin containing amine oxidoreductase family
  Distance: -9301; Region: intergenic

ACCATACTCC ATTTTAATGA TATAATTGGT GTATAATTTG GCTGAAAATA 
CTTTTTATTT TCACTTTTTC TCTTTACAAA TGGAAATTAA CTTATTTTTT 
CACTACTACT TTATTTTTTC AGAAATAAAT TACAAATGGA ACTTAACTTA 
CTTTTTCACT ATTCAAGTGT ATTTTCTATT AATTTTTCCA AACGAAAGAA 
CTCCCTATGA CGTTTTGCTC TCTCTAAACT TTTTTCAAAA ATTTCTCTCA 
TGAGTAGTTT TAAAATCGAA ATAGATCATA ATAAAACAGA NGAAAAACAC 
CAGAAAGCCA AAACAAAAAT TATGCAACCA GCCTCGTCAA AACACTGAAG 
ACTCCCGTGC AATACGCTCT TGAAGCCATG ATAGACATCC TAACGCCACA 
TATGAAGTAA AGCGTATTTC CTTTGTCACA CTATAAGCNG TATCTGTNGC 
NAAAGAATGG CTTTCNGTGA AAAGAGATAA AAACNTAACT CGTNCATNAC 
ATGNACTACT TGNAAGANNN TATNCNGCTT TTCANTGGAG AGAGANGGAA 
ACTNACTTNA CACNTNANCT NNGNGTNTNN NTNGNGAAAA AAANNNNATN 
NGGNGGANCN TTNANGNCNN NTNTNNNANN CCNGGNGANC NNNNNAANNN 
CCNNANAAAA ANNGNNNNGG NNNANNACNN NGGNNNNGGG CGG

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 720702 [Map]; Strand: c
  - AT4G01680.2 - [+] show detail - myb domain protein 55
    Distance: -3287; Region: intergenic
  - AT4G01690.1 - [+] show detail - Flavin containing amine oxidoreductase family
    Distance: -9185; Region: intergenic
Flanking Genome Sequence: 54-1648-1 - 3-prime edge
```
AGTATGGTTA TGGAGAATGA CACACGTCTA AATCCACTAA ACACTAAGTT 
AGGGTTTAAA TACTTCTTTG ACCAAGCTAA ATACTATTTG TCTTTCCATA 
AAAGTCGA
```

AT4G01680.2

Model type: Protein coding
Short Description: myb domain protein 55
Curator Summary: Encodes a putative transcription factor (MYB55).
Computational Description: myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01690.1

Model type: Protein coding
Short Description: Flavin containing amine oxidoreductase family
Curator Summary: Encodes protoporphyrinogen oxidase (PPOX).
Computational Description: PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2258 Blast hits to 2244 proteins in 787 species: Archae - 6; Bacteria - 1416; Metazoa - 200; Fungi - 137; Plants - 154; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).
Link: InterPro Scan - TAIR