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54-1662-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2482701 [Map]; Strand: w
      • AT5G07780.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon14 (3UTR)
      • AT5G07790.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -610; Region: promoter
      • AT5G07790.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -610; Region: promoter
    Flanking Genome Sequence: 54-1662-1 - 5-prime edge 
    CNTGGATAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CTAGTCACCA TAGTGTGGTA ACTCAGATGT 
    TCTTTTGTGT TGAAATAAAC AAGTGATGTA TATACTTTCA CTGCTTGGTT 
    TTGTTAAAAT GTGTGTGGTT GAGAAAAAAA AACAGTTGAA ATTTGCATTC 
    AATTAAAATA TTTGATACTA ATTCGAACTT GGGACTCTGA ACAGAANAAN 
    AAGTCCTCCT CCCAAGTCAA CTGATATTTT ATGTGTGGGC CGATCTACAA 
    TTNCTTTTAT TTANNAAAAA TGGCCCATTT AAAGGCCTTC AAGACTGAAC 
    CGGTTCGACC GGATGGTTTG TCTTGGNAAA TNGATTTTAA TTCTTCCCAA 
    AAAATGAGGA TTTGGGGNAT NNAAAANNAA TTNTTNAANA AAAACAANCC 
    GNGNNGACCC NANCNNGNNT NNNNGGGGGN GGGCCTTNGG GGGGGGCCNN 
    TNNNAAAAAA AAAAAAAAAA AANAANNAAN NCCCCCCCCC CCCNNNNNNN 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2482679 [Map]; Strand: w
      • AT5G07780.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: 0; Region: exon14 (3UTR)
      • AT5G07790.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -632; Region: promoter
      • AT5G07790.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -632; Region: promoter
    Flanking Genome Sequence: 54-1662-1 - 3-prime edge 
    TTNCCGTNCC GACCGTTTTC ATCCCTNAGN NCTATAAGGC AGNTNTCTTC 
    TTCTCCAACT CCGCTTGCTC TTTTTCTTAN NGACACTGAC TCGTTACTTC 
    GTCTTCTCCA TTTCCGCCTC CTTTGCAGNG TTTCTTCTTC TCCAACTCCG 
    CTTGCTTGAC ATTCTCTTCA TGTGCTTTCT TAAACAACCT TATAAAACTC 
    AAGAGTGTCG CCNGTAACGT GCAGCAATCG ATCACCATGT ATGTTATTAG 
    CAATGAGCCA CTTTCTATGG TATTAGAATA AATGAGGATG AANTTTATTG 
    TTTCCGANGC ATACCTTGTT CAAATGGATA ATGGTAGCCA AAATAGTGTG 
    CNAGTGCCTC ANCATTTCCT CTCTGTCGTC CATNATAATT AGATTGATTC 
    AAGAAAAAAT GGCTAATTCA NGACCAANCN CATTTGTCAA AGGNNNGGCG 
    CTTGGAATCT NAATAAGAGG TTGACAAAAA NTACCGCGGG GGNANTAAAA 
    AANCCCATCN CAGATGGCTA CATTGANTCT CANCNTNTGG ANATGAACAT 
    CCTTCAATTN ACCTGTNGAN AAAAACATNN AAANCGAATA TTATTAGNAN 
    CATGGGCATT TGANGCGAAA ANNTAANTTA TGGTGGNACN NNANTGAGCC 
    TAAATCTTCA AANTNCGTNG AATCACTTNT NGGATTATAA GATTTTGCAN 
    GNGNATGGCG GATATNNTTG AANNNNCCNN CTCCCATCCT TTANGNGANA 
    ANCTGTAGAA ANNATGGANC ATTNNNTTTN NCNGNANGC

AT5G07780.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07790.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07790.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1).
Link
InterPro Scan - TAIR