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Mutant Lines
54-1751-2

54-1751-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 16137450 [Map]; Strand: c
- AT4G33565.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT4G33580.1 - [+] show detail - beta carbonic anhydrase 5
  Distance: -909; Region: promoter
- AT4G33580.2 - [+] show detail - beta carbonic anhydrase 5
  Distance: -910; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAA CACCATCTTT TTTACTATAC TGACAAACTT 
TGATGGAACT TATAACCGTT GGATTCAACC CTATGGTTCT GATATGCCAA 
ATCGGATGAT CAACAATAAC AGGTGCTGGT CCATCAAAAT CCCAATTCCT 
AGCTTCTTCC ATACTCCATC TTCTTGATGT TGTTATTGAT CTTCTCCTCC 
TATAGTAAAA CTTGAAGCAG AGAACAAGTA AAGTAAGGAG AAACAGAGTT 
GTGATGATAG ATGAAGCAGA GATGATCAAG ATCCTCTTTA AGTTGTCGTC 
GTGGTGGATC TCTGCAGGTG GTGAAAGACC TGAAATTACG ACGATCTCGC 
AGATGGAAGG ACACTCGTCA AGACAATAGG ATGAACAGTA TCCTAGAGTT 
TTCAACTCTT GGATGCAATT ATTTTTACAG AGAGAGTCCG AAAAGGTTTC 
TTTGGGCATA TCCTCCAACA GAAATCTGTG AAGGAACCTC ATGATCCTTG 
CTTCAAGATC ATCAATCAAC AAGCAATGGA GAAAGAGGAA AAAGAAAGAG 
AATAGAAGAT GAGAGTTGTC TTCGTTTTTG TTCTCTCTCT TTTGCTTTCT 
TTCTTTAGAA TCAAGTTTGG TCAACAAAAG TAGGTTGACG GTATCTATCA 
TCCTAATTTC ACCAAAATAA TTGATTTTTA AATGGTTGGT ACAAAATAAA 
AATTATAAGC TCCAGCCCNG

3 prime edge [+] show sequence

Chromosome: 4; Position: 16137459 [Map]; Strand: c
- AT4G33565.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT4G33580.1 - [+] show detail - beta carbonic anhydrase 5
  Distance: -900; Region: promoter
- AT4G33580.2 - [+] show detail - beta carbonic anhydrase 5
  Distance: -901; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GAAGGAACTG ATTGCTCCGT TTGTTTAAGC GAATTCGAAG AAGAAGAGAC 
GCTTAGATTG TTACCAAAGT GTAAACATGC TTTTCATCTT TATTGTATTG 
ATACTTGGCT TAGATCACAC ACCAATTGTC CGCTTTGTCG TGCTCCTATC 
GTTGAGGCCA ACACAATGAT TGATGATCAT AGTGAGGGGC TAGAGGAGAT 
AAGTGTGATG ATTCCAGAAG AAAATGGAGA TGATACCGAT GAAGAAATCG 
AGGAAGAAAG AGATGGCTTT GTTAGTAATG TTAGTAGAGA TCATGGTGAG 
TCACAACAAC AGCGAGTGAG ACGATCAGTG TCGTTGGATT CGTTATCGGG 
TTTAAGGGTA AGTGAAGTTG TTGTGGGTAG AGAAAAGGAG AAGTTGAAGA 
GAGGCAACAA TATCGGATCT GGGAGGTCAA GTTTATTGAA GAGATC

AT4G33565.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 9700 Blast hits to 9677 proteins in 303 species: Archae - 0; Bacteria - 6; Metazoa - 2357; Fungi - 776; Plants - 5096; Viruses - 103; Other Eukaryotes - 1362 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G33580.1

Model type: Protein coding
Short Description: beta carbonic anhydrase 5
Computational Description: beta carbonic anhydrase 5 (BCA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 6 (TAIR:AT1G58180.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G33580.2

Model type: Protein coding
Short Description: beta carbonic anhydrase 5
Computational Description: beta carbonic anhydrase 5 (BCA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 6 (TAIR:AT1G58180.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR