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54-1764-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22131332 [Map]; Strand: w
      • AT5G54510.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-1764-1 - 5-prime edge 
    CTGGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CTCCATTGCT TGTGACCAGG GGACCATTTA 
    GGACACTTGG GGCTGAAGTA ACTATCAACA ACCCTAGAGT TTAAAAGCTC 
    AATGATCGGA GCAAACTTCA CACACCTTGG TGTCTTGTAC TGATTGATCG 
    ATGCACCCAA GCTTATCGCG TAATCCATGA GCTTATCGAA AGTCCCTGAC 
    TCGACCATCT TGATCTCCAA TGGTCCAATG GACTTGTCAC TGACCCTTCC 
    TTGTCTATAC ACACTGTTAA GTGATTCCTC TATGGTTAAA CAGCAATCCT 
    CGAAGACCGA GGGAGGAATT GGCGTGTTAC CGTTCAAGCA GAGCTCCCAC 
    AATAAGACAT AGTGGCCCGG GATAGATGAT GTGTCCGCAT AGCTAGTGTA 
    CTCGGAGAGT GAAGCATCNT NCGGAACAAG GTGNGTTACC GCGTTTTTAA 
    CTGCGGNTTG AAGCTNATNC TNATNGGTTN TGANCGANNC NNTGCTTANG 
    ACCNCGGGGG TTGCGGCATA CNAAAAAAAA CTGANGCGCN TGGNTNTTNA 
    ACCANCCNCG CTTANNANAT CANCAACNCT NTTNNTGNAA AAAACNNCCN 
    NGNANNTNNC

AT5G54510.1

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).
Computational Description
DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR