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Mutant Lines
54-1768-1

54-1768-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 286207 [Map]; Strand: c
  - AT3G01790.2 - [+] show detail - Ribosomal protein L13 family protein
    Distance: -429; Region: promoter
  - AT3G01790.1 - [+] show detail - Ribosomal protein L13 family protein
    Distance: -447; Region: promoter
  - AT3G01800.1 - [+] show detail - Ribosome recycling factor
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-1768-1 - 5-prime edge
```
AGCACGAGCG AGTGATTGAT AAATGGAAAT GAGGAATAAA CAACATACTT 
GATTTTTTGC CTTTTGCAAA GCCTCGACGA GAATCTCTAA GGAAATCGGG 
CATGGACAAA TCGAATTGCA GATC
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 286377 [Map]; Strand: c
- AT3G01790.2 - [+] show detail - Ribosomal protein L13 family protein
  Distance: -599; Region: promoter
- AT3G01790.1 - [+] show detail - Ribosomal protein L13 family protein
  Distance: -617; Region: promoter
- AT3G01800.1 - [+] show detail - Ribosome recycling factor
  Distance: 0; Region: intron1 (CDS)

CTCGTGCTGA TAGATTCTTC TTGTACTAGA TCAAAGAGTT GTTGTTTTTT 
GTTGTTGTTG TTGTATGAAC AACGGCATTT CTGCCTTCTT CTTCTTCTTC 
AGAGGACGAT TCAGGAACAG GGATGGTCGA CGCAGCTCCA GATATCGGAC 
CTACCGTGAA AGCAGCAGCC TCTTCTCAAA TGGAGGCAGC CATTGATGCA 
TTGTCCCGGG ATTTAACTAA ATTAAGAACT GGAAGAGCCG CTCCAGGTAC 
TTATCACCTC TTTCTTTCGG GTTTAGGTTA AGCCTCTCTC TCTCTGTGTG 
TGCTTATTGT GTGCATTTGC AGGAATGCTT GATCATATTG TTGTTGAAAC 
GGGAGGAGTA AAGATGCCAC TCAATCACTT AGCTTTGGTC TCTGTCTTGG 
ATCCCCACCT ACACAAGAAA ATTGTTGATA AAACTCCAAA ATAGCATTTT 
CTTTTGATCC TATTTTTTTT TTNTCCTTAT NGGNNAAAAA ANATAAAAAA 
ATTTCNGGGT ANCAAACNTT NTNTAAAATT TNTCGNAAAT TCAANCCCAT 
AGCTGANGAT AGANCTANAA TANATNTTTT TTGTTTCCTA CTCNCCCGAN 
CCCATATTNT GGCTTTTTTA TCAATCTCTA ATTCTAACCT GCCTCCCCAA 
TCTGATNTTN TGGGGCCGGT TTANACCGAA ATCCCATTNT GATCCAATTC 
TGACN

AT3G01790.1

Model type: Protein coding
Short Description: Ribosomal protein L13 family protein
Computational Description: Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins in 2675 species: Archae - 7; Bacteria - 5222; Metazoa - 123; Fungi - 136; Plants - 125; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01790.2

Model type: Protein coding
Short Description: Ribosomal protein L13 family protein
Computational Description: Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins in 2675 species: Archae - 7; Bacteria - 5222; Metazoa - 123; Fungi - 136; Plants - 125; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01800.1

Model type: Protein coding
Short Description: Ribosome recycling factor
Computational Description: Ribosome recycling factor; INVOLVED IN: translational termination, translation; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: ribosome recycling factor, chloroplast precursor (TAIR:AT3G63190.1); Has 7776 Blast hits to 7776 proteins in 2635 species: Archae - 0; Bacteria - 5288; Metazoa - 113; Fungi - 65; Plants - 94; Viruses - 0; Other Eukaryotes - 2216 (source: NCBI BLink).
Link: InterPro Scan - TAIR