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54-1797-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26461507 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-1797-1 - 5-prime edge 
    CNTGGATAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATTC ACAGGTGGTG TACACTTTAT TACGTGCTAA 
    TTTAATTAAA ACACTTTTCT ATCTCGTTCA CACTTCACAC GATTTTTGTA 
    GTTATTACAT GTTCAACTTA AACACGTCAT ATATTACAAT TTTTTTTGTT 
    CTTCTCTTGT GGGAAAAGGT GAGTTTGAGA AATTGGCAAG GGTGACGATG 
    AAAAAGAGGT TAACGGGGAT ACGATACTCA GAGAAAGTAG TAGAATACTG 
    TGAGGAGATC ATGAAAGCGT CAGGGAAATA CACAAGATCC GAAGCCAAAG 
    CCATTGACCA ATTCTTGATG GTCTTCAAAA ACCAAGATTT CCCTCCCGGC 
    TCTTCAATCA TCTTCGCTAT CTGTCCTAAA GGCTCTCTCA CAGTGAGTCA 
    ACTTTATTTT TCGGATTATC ATTTCGAATA ATATTGGTCG AATGAATGAT 
    CGAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26461513 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron2 (CDS)
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-1797-1 - 3-prime edge 
    AATTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCCTAGTGAC GAGTTGACTG AAGAAAGGGA CGGATTCCGT CAACTCCTTT 
    GCATTCTTGC CTTTCCACTT AGCGGAGATT GACGGCAGTG CCATGGCTTC 
    AAGGTAGACT CCGATGACCG TCACAATCAC AGAACTTGCC TTTAATATCA 
    AACCATCGTA TCCCTGCGTG ATTAAAGGTA ATTAGCCACA TAATGCTGCT 
    GTGTGCATTA ATTGTATAGA CAGACTATTG ATGCTAACCT GCACCACCGA 
    GGAAAAGTCT TTTGTGGGAA GCGGGCGACT CAACAGCCGG AGGAAAAGTA 
    AATGCGTCGA

AT5G66220.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR