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54-1821-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26464346 [Map]; Strand: w
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 215; Region: intergenic
      • AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -1826; Region: intergenic
    Flanking Genome Sequence: 54-1821-1 - 3-prime edge
    GATATAGACA AATTTGGATG GTTTAATAAA GAGATATATA TTTGTTAATT 
    GAGACCAGGT CTATGTCGAA AATACAGCTC ATGGATATCA AATTCTTTAT
    CAATAGATTC ATCTTGTATG TATCAATTGA CCAAGTACAG TGGTTTATGT
    TGATAACAAC AGAGAACCAC ATAGTTTTTC TTTATTTTAG CTGTAGTGTC
    GGCTGAACCA ATGAAACTCA ACTTTTCACT AATCTATTAT GTTCTAATGC
    AAATGTCTAA TCTTGATATC GGTTAAGTCC GGTTTTTATT TTTAAGTGTT
    TAGGATAGAC TACAATTGAA AGCCTTTTTT CACAACAAGC AAGAGAAGAT
    AAAAATGAAA AGAGTCATAT TCCGATTACA CTTTTAGTTA TTGAAAAATA
    ACAACAAGGT AATAACAAGA ATCAGATTTG TGAATCTTCA AGCAACAACA
    AGAAAAAAAA AAAAAAAAAG GNNNAANNTT TNNGGGTTTT TNNCCNNNCC
    CCCAAAAAAA AAANTTAAAN NNNACNTTTT TTTTCCCNGG AAANTTNNNN
    TNTTTTNNTN GGGGGGGNNN AAAACCTTTT AAANCCCNNN CCNCGGGNAA
    ANNNNTTTTG GCCCCCNAAA ATTTTTTNTT TTNNNGGGNA ANNNNAAATT
    NNGGGNGNTT CCCTGNAAAN NNNNNTTTTN CCCCTANTTT NNNTATTNC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66240.3

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link
InterPro Scan - TAIR