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Mutant Lines
54-1859-1

54-1859-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23051303 [Map]; Strand: w
  - AT3G62280.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
    Distance: -151; Region: promoter
  - AT3G62290.2 - [+] show detail - ADP-ribosylation factor A1E
    Distance: -241; Region: promoter
  - AT3G62290.3 - [+] show detail - ADP-ribosylation factor A1E
    Distance: -241; Region: promoter
  - AT3G62290.1 - [+] show detail - ADP-ribosylation factor A1E
    Distance: -347; Region: promoter
Flanking Genome Sequence: 54-1859-1 - 5-prime edge
```
CTNGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCC ATCCGATCGG CCATGTTCTA TAAGGATTGT 
CAGAACTTGT TGAGCTATTA AAATACTCCG TACAACTTAT TTGATTAATA 
TGGGCCAAAT CCGAAAATAA ATGGACCTTA TCGAATATTT TGTTCGAAGT 
CCAGGCCCAC TAATCGAGTG CGGAAAAACA AAAACAAATG CGGTGAGCGT 
GGATCGAACA CGCGACCTTC AGATC
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 23051297 [Map]; Strand: w
- AT3G62280.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: -145; Region: promoter
- AT3G62290.2 - [+] show detail - ADP-ribosylation factor A1E
  Distance: -247; Region: promoter
- AT3G62290.3 - [+] show detail - ADP-ribosylation factor A1E
  Distance: -247; Region: promoter
- AT3G62290.1 - [+] show detail - ADP-ribosylation factor A1E
  Distance: -353; Region: promoter

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTT 
ATAGGTTGAT TGATTGCTTT TACTTTGAGA TTATTTAGAG ATTTATATAA 
TGCGACTTGC AATAGTACTT ATTGACTTAC ATTCAAAAAA TTTGACTTTC 
TAAGCCAAAG ACATTACTAT ATGTAAAAGC TTCAGATCGT GAATCTTGAT 
TAAAATTATC TGAGTAGCAA GAATTCAAAA GAAATGGATT ACACNTGTTT 
CCTCTCTACA ATGCTTCTTC TTAGTTTTAT GTCTATCTCT TTTGGTTTGC 
TCTAACTCTG AAACTAGTTA CAAGTCAAAC AAGAAACCTA TATTGATAAA 
CTTCGGCGAC TCTAACTCCG ACACCGGAGG AGTTCTTGCT GGAGTTGGAC 
TTCCTATCGG ACTCCCTCAT GGCATTACCT TCTTCCATAG AGGCACTGGT 
CGTCTCGGTG ACGGTCGA

AT3G62280.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G56670.1); Has 3192 Blast hits to 3150 proteins in 118 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 17; Plants - 3087; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62290.1

Model type: Protein coding
Short Description: ADP-ribosylation factor A1E
Curator Summary: A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Computational Description: ADP-ribosylation factor A1E (ARFA1E); FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15041 Blast hits to 15022 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7727; Fungi - 1941; Plants - 2031; Viruses - 3; Other Eukaryotes - 3274 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62290.2

Model type: Protein coding
Short Description: ADP-ribosylation factor A1E
Curator Summary: A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Computational Description: ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1).
Link: InterPro Scan - TAIR

AT3G62290.3

Model type: Protein coding
Short Description: ADP-ribosylation factor A1E
Curator Summary: A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Computational Description: ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1).
Link: InterPro Scan - TAIR