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54-1877-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 301839 [Map]; Strand: w
      • AT5G01770.1 - [+] show detail - HEAT repeat ;WD domain, G-beta repeat protein protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1877-1 - 5-prime edge 
    CTTGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATAA TGAGCGGATG ACGAAGAGAT AATCCGGTAA 
    GGACGGAGAG GAGCGAAGCG GAAGCCCTAG GAACACCGGA GAAGATGAAG 
    AGTTAGATGG TGGTGCACAA AGAGAGAAAT GTGGAGAAAT GCCAANTNTT 
    GNNATTTTNN NCTCANCCNC TANAAAAAAA AAAAAAAAAA AAAAAAAAAA 
    AAAAAAAAAC CGGGNGGNCC CCAAANNGNN NGGGNTTTNG NCCCCCNNTN 
    TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT NNNNGNNGGN TTTTTTTCCC 
    CCCCGNNAAA AAAAAAAAAN TTTTTTTTTT TTTTTTTNNA AAANNTTTNA 
    NNAAAAAATT TTNCCCCCNT TTTTTTTTTT TTTNCCCCCN TNNNCCCNNN 
    NTTTTTTCCC NAATTTTTTT TTTTTTTTTT NAAAAAANNG GGNNTTTTTT 
    TNNNNNNNNA NA

AT5G01770.1

Model type
Protein coding
Short Description
HEAT repeat ;WD domain, G-beta repeat protein protein
Curator Summary
Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development.
Computational Description
RAPTOR2 (RAPTOR2); FUNCTIONS IN: binding, nucleotide binding; INVOLVED IN: cell growth; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT3G08850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR