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54-1889-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96725 [Map]; Strand: w
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -70; Region: promoter
    Flanking Genome Sequence: 54-1889-1 - 5-prime edge 
    CCAAAGAGCC TCCTTCTCTT TACCATTTTA TTCCCCAATT TACCGTAAAT 
    GACGCTTTTA ACCTTGAGGG AGATACTGGT AATTTTTTCT AGTAGTTCAT 
    CAGTCTCTCA ACAACAAGAA TCTGAGAATA ACCAAAACTC TACCGTTTCG 
    TCTACCCAAA CTATCCTTCT CCTACCATTG CCTCTTCGTC TAACTCAATC 
    GTTTTTCTTA ATTAATCAAA TTACATGACC TATCACCTCT TCAAGGAGTG 
    TGATGAAAGA GAATGGGCCG GATATTCCCT TTTTTATCTG TTGGGCCACA 
    ATAGTAAACA ACTTATATAA TGGGAAAACT CTTTTACGTA ATTGATTTTT 
    GGGCCCATTA GTAATAGGGC TTAGTTTCTG GTAAATAATA AGAGCCCACG 
    ACGGCTTTGG TGTTCTTGGG TCTTTNNCTN CTNNGNGGNN CTTGGNATTA 
    AGGCNNCCNT NCNNTAANTN CNNNNANGGG GGGGNNCNNC NNANCANNNN 
    ANGANTGTNT NNNNNNNNGG NGGNNNNNGG GGGNGNCNNN AAAAANAAAA 
    AAAANANNNN ANANNANAAA ANGGGGGNGG GGNCTNTNTT GGNNAAAAAA 
    AAANNTTTTT TNTNTTNNNG NGGNNNNNNN NNTNNNNNNN GNNNNNNNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96609 [Map]; Strand: w
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1889-1 - 3-prime edge 
    CTCTTTGGTG GTGGGAGTAG GTGATGCCAA AGTAGACGAC TACTTGTAGT 
    AAACAAAACC TTTGGCTTTA ACACTCTCCT CCAAATCCCA GATC

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR