1. Home
  2. Mutant Lines
  3. 54-1900-1

54-1900-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18235256 [Map]; Strand: c
      • AT4G39150.1 - [+] show detail - DNAJ heat shock N-terminal domain-containing protein
        Distance: 0; Region: intron3 (CDS)
      • AT4G39150.2 - [+] show detail - DNAJ heat shock N-terminal domain-containing protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-1900-1 - 3-prime edge 
    CTTCACCTAG TATCTTCATT CACACAACAC CAATTTATAG GTAAGAGTGA 
    TCCAGAATAT CATCCAATCA AACACTCCTT GAAAACCCTT GTGAAAGTCG 
    TTAAGCAAAC TAATAAACAT AGCAATAGAG ATGATTCTAT ATTTTAAGGT 
    GAAAGGAAAA AATCACCTGA AAGTTTTTAG CAGCTTGAGG ATCACCAGGG 
    TTCTTGTCTG GATGAACTTG CCTTGCCTGC AGAAAAAATG AGAGCCCTAA 
    AATGATCAAC CAAAATTGAT CTTACAATCA AAACCTAAAA AGCTACCAAA 
    TTTGGAAACA CAACAAGTTT CTTATCAATC CATTATCTGA TTCTTAGCAT 
    CATAATCAAA TCTACGAATT TAAAAGCT

AT4G39150.1

Model type
Protein coding
Short Description
DNAJ heat shock N-terminal domain-containing protein
Computational Description
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1); Has 22737 Blast hits to 22610 proteins in 3244 species: Archae - 169; Bacteria - 9228; Metazoa - 3910; Fungi - 2127; Plants - 2302; Viruses - 18; Other Eukaryotes - 4983 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G39150.2

Model type
Protein coding
Short Description
DNAJ heat shock N-terminal domain-containing protein
Computational Description
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1).
Link
InterPro Scan - TAIR