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54-1903-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59264 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1903-2 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC CCTGCCTATC ATTTTCCCTT TGTCATTAAC 
    TTAGCTGATT AAACAATTCA TCAGCTTCTC TTACACAACA TTTTGTTAAT 
    CTTTGCTTTC TAATCTTAAC TATGTCTTCT ATTACAACCC CACTCTTACA 
    TCACGCGCAG TGGCTTGCAA ACTCCTTTCA GTGACATGAA CATGATGGTA 
    AACAAAAATA CTAAATGTTA TGATATATTT TTAAATATTG TATTTGTCTT 
    CTTGAATTAC TAGAAACTAT TAAAAAAAAA AACATTTNCC CCANNTTTTT 
    NGANGTNGAN CNGNNTNTTN ANANGTCANA ANACTNGCCC AAAAAAAAAA 
    NGGGGGGNNA AAANNNTGGG GNANGGNTTG GGTTTTTTNA AAATNNNTTT 
    NANNNAAAAA ANTTNGGGGG NNGGAAAAAA ANTTGGGGNA NNNGGTTNGN 
    TTNGNTTNNN NCAAANGGGG GGGGGGNTTT TTCCTTTNGG GGGNANTTTG 
    NCCCCNAAAN TTTNNTTTNG GGGNNGGNAA AANTNNNAAC CNGGGNNGGG 
    NANCNCGGGG GNNNTTNAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59216 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-1903-2 - 3-prime edge 
    GGAAACGGAA ATAAGAGAGA AAAAGAAAGG AGGAAGCCCA CTTTGCCACT 
    TTAATATCTT GCACGCATCC AATATACCTC ACCACACCAC ATCACAACAA 
    CGAAGAAGAA GAAGAAGAAG AAGAGCTTCA AGAAGACAAA TACACTATTT 
    TTTATCGTCT GCAATGCCCT TACCCTTTGA AGAGTTTCAA GGGAAGGGGA 
    TTTCTTGTTT CTCTTCTTTC TCGTCTTCCT TCCCCCAACC ACCGTCGTCT 
    CCGCTTTTGA GCCACCGCAA AGCAAGAGGC NGGCGAAGAA GAAGAGGAAG 
    AAGTTCCCGC GGCGGAGCCT ACCTCTGTTC TGGACTCCCT CATAAGCCCA 
    ACCTCTTCCT CCACGGTGTC TTCCTCTCAC GGCGGAAACA GCGCCGTCGG 
    AGGCGGCGGC GACGCCACCA CCGATGAGCA ATGCGGAGCC ATTGGGTTGG 
    GTGATTGGGA GGAGCAAGTT CCTCATGACC ACGAACAGAG CATTCTCGGA 
    CTCATCATGG GAGATTCCAC AGATCCCTCT CTTGAACTCA ACAGCATTCT 
    CCAAACATCT CCCACCTTCC ACGACTCTGA CTACTCATCA CCCGGTTTCG 
    GAGTCGTCGA CACCGGCTTC GGTTTAGACC ACCACTCTGT TCCGCCGTCA 
    CATGTTTCCG GTCTTCTGAT CAACCAAAGT CAAACCCACT ACACACAGAA 
    TCCTGCGGCT ATCTTCT

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR