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Mutant Lines
54-1935-1

54-1935-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26462979 [Map]; Strand: c
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon6 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon2 (CDS)

CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCTG GCCACTACGA TCGGTGAGTC GTTGGTTATG 
TCAAACAACG CAGACCTGTC TTTTGCACCG TTTCTTTGTA CCGACTTCGA 
TTGACATTTA TCTGACCAAT CATCCGCTTT CTCTGTAGGA GATAAATTAT 
AAACGATCAG ATCCAGAAAC AATAGTCCGA CTCAATAAAC AAAATCAGGG 
AATCGGACTA TGGAGACTTA CTTGAGGATA AGAGATTATT GATAGCAGAG 
CGGGTCTGAG ATC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26463031 [Map]; Strand: c
  - AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon6 (CDS)
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 54-1935-1 - 3-prime edge
```
GTGGCGATGC AGACACCGTC CTCAGGAGTT GTTGGGAAGA GGAACATGAG 
CAGAATCAAT AACACTCCTG GATCTGGTGA GGCTCTCTTG AGAGGCCAAG 
TCAAGACTCT CTTGCAGAAG GTTGAGGAAG AAGCAGATC
```

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR