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Mutant Lines
54-1981-1

54-1981-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 22274350 [Map]; Strand: w
- AT3G60260.2 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: exon2 (CDS)
- AT3G60260.4 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: exon2 (CDS)
- AT3G60260.1 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: exon2 (CDS)
- AT3G60260.3 - [+] show detail - ELMO/CED-12 family protein
  Distance: -155; Region: promoter

CTCGGAAGAG AGTGAGAGAG AGAGATGGAT GATAGAGGAG GATCGTTCGT 
AGCAGTGAGA AGGATTTCAC AAGGTCTAGA ACGAGGAAGT GTTTATCATT 
CTTCTTCTGG TAAATTTCAT CTTCACTTTG TACGATGATT CTTTCTATTT 
TTTTTGCTTC TTCTGGAACA AACGCGTTTT CTCATCATTA TACATCTCTA 
TCTCTATTTC TCTCTCTCTC TCTCTCTCCC ACTTTTNCCA CGTTTTCTCT 
TTCTCTCTGT GTATTCGCTG GCGANNGCCT TTTTATCTGA GATTTAGTGT 
CNCANATCTA CGTTTCNCCA TTNACTTTTT CGNNGCTCTT TCTCATAAAT 
TCGGGGAGTT TTTGTTATGT GTGTNGATCT TCTTTGTAAG NCCTATTTTT 
AGTATTNCCC ATACNAAANT GTGNGCGTNG ATTTCTCTAG NNGAGATTAG 
TCTTCTTCCC TGCAGATNCC ATTTCTCTTT NNGACTATAT NGCTAGTNTG 
TTTTNCCATG GAAGCATGTT NNGCTAAAAT TTTNTGTNAC TNGCTTCAAT 
TGTGANTGAG AATAAGTNGA AGCTAATGGA TGATGTGTTC TGGAATCTTN 
GATTTTTCTT TCATCGCTCT GTATTNTGAC AAGTCTGANG CTTAAATGAC 
ATTGTNNGCC TTCTCACGTA TTAGNTATCG TATNTGTAAT ATAAAAGAC

3 prime edge [+] show sequence

Chromosome: 3; Position: 22274234 [Map]; Strand: w
- AT3G60260.2 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G60260.4 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G60260.1 - [+] show detail - ELMO/CED-12 family protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G60260.3 - [+] show detail - ELMO/CED-12 family protein
  Distance: -271; Region: promoter

CTTCCGAGTC ACCTCAATCA CCAAATATCT TCTATCAAAT GCAGAAACAA 
ACAACAAATA CAAGTTATCG AATCAATCGG AACTTTCGGA ATCTGAATCA 
AACAGAGACG CAATGCGAAT CCATATCATG AGAAACTTGA TCAAAAACAC 
CTAAACAGAG ATAATCATAC TATATGTACC CGCCGGAAAA CGAACAAATC 
GGCGTCGCTG CTTTTAGATA CAACAGAGAG ATAGACGAAA ACAGTTAGGA 
TTGAGAGATC TACCGAGAGA GTCGCCGGAG TTTAGGCGGC GATTGAGCTT 
AACAGATGGC GGAATTTATG AAGATTCGGC CGTTTCTCTT CTTTTTTTTC 
TTTCTTTGGG TTTAAGAAAA TAAAAATGGG GATTTACAAC TAAAGGATCT 
GGCGCGTGTT GTTCAGTCGC TATCAAAAGC T

AT3G60260.1

Model type: Protein coding
Short Description: ELMO/CED-12 family protein
Computational Description: ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G60260.2

Model type: Protein coding
Short Description: ELMO/CED-12 family protein
Computational Description: ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G60260.3

Model type: Protein coding
Short Description: ELMO/CED-12 family protein
Computational Description: ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G60260.4

Model type: Protein coding
Short Description: ELMO/CED-12 family protein
Computational Description: ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link: InterPro Scan - TAIR