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54-1986-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21400 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -37; Region: promoter
    Flanking Genome Sequence: 54-1986-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG CTCGTCTTCC TCTGGAGAAA GAAAAAAAGA 
    GAGGAAACAA TGGAAAATCG CCATCTCCCT TCCAAATTCT TCTCCTCTGC 
    TTCATCCATG GCTCAGAATC AACTTATCGA TTCGCTAACA TCTCACATAT 
    CTTTGTACCA CTCCCACTCG TCTTCCTCTT CAATGGCTAA TACTATCCCC 
    AATCCTAGGT CGGCGATCCT CCGATGGTTC TCTTCTCTCA GCGTCCACCA 
    GCGCCTCTCT CACCTCACCG TCGTTGATCC CAAGTTCGTC CAAATCCTCC 
    TTCAGATGCT TGGTTATATC CGCACTAAAG GCCCTTGCTC TTTCATCATC 
    CTCCCAGACC TCCCTTCCTC CTCCGATCTC CCCAGTCTCT GCTTTAAAAA 
    ATCTCGTGGC TTAATCTCCA GGGTTTCCGA GTCCAACGAG TCAGAGCGTT 
    TCGTTTTCGA CTCTACTCGG CTCTTTGGTT CTGGAGAAGG GGAAAGGGCT 
    CAAGATTGCT CTTGCTCCGT CAATTCCCTC GATTCTGTCG TCATGGCCGA 
    GGAATTTCTT ACAAATGTGG ATCGTTTCGT GGAGACTATG GACGTCTTAT 
    CGGATGGAGC ATTTCTGAGA GGAGAAGAGA GTGATTTGGG GTCCAATTGG 
    GTAGAATTAG AGTGGCTCAA AGCCAAAGGC TATTATAGCA TGGGAAGCCT 
    TCGTTGCAAA TAGGTTAGAG GTAAGCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21350 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -87; Region: promoter
    Flanking Genome Sequence: 54-1986-1 - 3-prime edge 
    CGACGAACGG CTAATAACTT AAACCAACTC AATACCCAAC CGGAAATTGG 
    AACCGGTCTT ACTTGCTAAC CAATCAATAG GAGTCTATTT AAAACGGGCC 
    TGGGCTTGAG CCCATTGTAA ATTCTCGATG CTCTTCTTCT TAGACAGTAG 
    TAAAATTGGG CCTTTTTGTC TCGGCCAAGC CTTTTTTGCG TCGGCGATAC 
    TCTTTTTCTA TTTCTCTTAG CTACAGTGAC CATCTCATCT CATGTATTTG 
    CCTTGTTGGT GTGAAAGGAA TCTCGCATTA ACCAACATTT GACTTTTACT 
    TTCTTTTTAA ACCTATCACA CACACACACA TGCATGTGAC ATATGTATCA 
    CATCATCTCA AATTTCAACT TTTTCTTTTT CAGTTTTGAC GAAAAACAAA 
    TCAATATTAC ACATTATGCA TCTGCAAATT TTAGCTTTCA ACTTTTTGCA 
    TTTTACACTA CAAATTTCAA TATATCTGCT CAACACACTA TGTATTTTGA 
    AATTTAAATA GTTTACATTT GGTGTTAAAA AAATACATTT ATGTGTGAAT 
    AATAGATAAA AAAATAGCAT ATATATTATT CTTAACTTTT GACGAACATG 
    GCAACCACCG TTTTCATATT TTTGGGAGNG TATATATNAT ACTTAACTGN 
    CAAACCAACT GGTGTNNA

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR