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54-2070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208774 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2070-1 - 3-prime edge
    NTCCCTGCGN CCATGAAAAT NGACAAANAA GAAACTTGTA GATTAATACA 
    AAATCTAAAC CAAGCTCTTC CATTTTNGAC CAAAGATCAA CAACTCATCT
    AAGACCTATC TAAAAGATAA ATCAATCAGT AGTAGATATA CCAGATATGC
    GATTCCCATC TGCCTGTCCT CCGATAGAAA GTGACGCCTC TATACTGAGA
    ACTCTTAGAC CTAGGACCTC TCCTGCTTTT CTTCACCGGC TGTGATGGTG
    GCTGCATCAC CCGTGAAGCA TCGCCACCAC CGCTCCCGCT ACCTATAAAG
    TCTCCACCTT GTTTCCCCCT CTGGAAGGAA ATATCAACGG TGCTCCTTGA
    ACTTTGAGCG CTCGAATCCA TAAAGTTCAT GCCTTTAGCA ACAGGAAAAA
    ACTCCTTAGT CATCATCACA GCACTTCTTT CATCATCATC TTCTTCTTCT
    TCTTCTTCTC CTCCTCCTTT CAGTATCTNA AATTGAAACT TGACCGTTCG
    NGTNNAGCAC AACTCATNTT NACCATNTNT NCNGNTNGAA NCTTNNNCAT
    TAACAACANA ANANNNNGAN GNNNNCNANN NNTNCNTNTN ANNNNNANAA
    ANCCC

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR