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54-2070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208774 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2070-1 - 3-prime edge 
    NTCCCTGCGN CCATGAAAAT NGACAAANAA GAAACTTGTA GATTAATACA 
    AAATCTAAAC CAAGCTCTTC CATTTTNGAC CAAAGATCAA CAACTCATCT 
    AAGACCTATC TAAAAGATAA ATCAATCAGT AGTAGATATA CCAGATATGC 
    GATTCCCATC TGCCTGTCCT CCGATAGAAA GTGACGCCTC TATACTGAGA 
    ACTCTTAGAC CTAGGACCTC TCCTGCTTTT CTTCACCGGC TGTGATGGTG 
    GCTGCATCAC CCGTGAAGCA TCGCCACCAC CGCTCCCGCT ACCTATAAAG 
    TCTCCACCTT GTTTCCCCCT CTGGAAGGAA ATATCAACGG TGCTCCTTGA 
    ACTTTGAGCG CTCGAATCCA TAAAGTTCAT GCCTTTAGCA ACAGGAAAAA 
    ACTCCTTAGT CATCATCACA GCACTTCTTT CATCATCATC TTCTTCTTCT 
    TCTTCTTCTC CTCCTCCTTT CAGTATCTNA AATTGAAACT TGACCGTTCG 
    NGTNNAGCAC AACTCATNTT NACCATNTNT NCNGNTNGAA NCTTNNNCAT 
    TAACAACANA ANANNNNGAN GNNNNCNANN NNTNCNTNTN ANNNNNANAA 
    ANCCC

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR