1. Home
  2. Mutant Lines
  3. 54-2129-1

54-2129-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23345836 [Map]; Strand: c
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: -66; Region: promoter
    Flanking Genome Sequence: 54-2129-1 - 5-prime edge 
    CTNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG AGNATAATAC 
    TCCCACTGAC GACGATGCAC TGNTTTGTTA CCTTTTTCTA TTNATTNNCC 
    ATCGTTTACA TATNGTACAA CTGATCTTAG TATTTGTTTT TTCTTCTTCT 
    TTTAAATGGT GTAATTTCTC TGAAGAAAAT TACAAATATA ATTAACACAA 
    ATTGAAAAAG GGCATACTAT AATTTTTGGT AACAAATTAT TATCTCACAA 
    ATAACTAAAT CTCGTCAAGT CAATTTTTAT TTTTTAATTA GCCGATGTGA 
    ATAATCCTTT TTTTTTGACA TATTTTTTTC TTTTGTTNGG GCAGCTAATA 
    TTTGTTGCTT GATAAAAAAA ATTATATGTT CTACTAAACA AAAAATGCGA 
    CACGAGATAG TTTTCTTATT TTTTTTCCCA AACTTGTATA TTATACATGT 
    ATAATTAATC TATTTTTAAA AGCCTTAAAC TATNGCTAGA CNCATAAATN 
    TAAGTAATTC ACGAATTAAA ANAACATAAN TCAAAGTNTN CTTGACNGGA 
    AAAAAAATCA AAGTNTAATC ANAATTTTAC TAAACAAAAA AACATTGATG 
    GGGNGGTNGG ACTGTTCTCN CACGTGNGAG TAGGCATGTC AGTTTGAAGG 
    TCAAGGAGTA AGCNCNAACC TNGGNTGCCT TACCGGCTCG GCTCCCGCTA 
    ATCACATGGN GGCCTCTTCT TACTAATCTA CTAGTATCTT TTTATTTAAN 
    GCTAATTAAC TCTTCTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23345907 [Map]; Strand: c
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-2129-1 - 3-prime edge 
    GGAGTATATA ACTACCACCA CCCACTCACC ATTCCGGAAT TATCTCTGAA 
    TCACTCATAA ACCCTTTCTT CTTCCTTGTT CAAATCCACT CACTCTTGGA 
    GAGAGACAAC TCAAACGCAT AGTCTCTCCT CTGTATTTAC TCGTTATCGT 
    CACTGTGAGA GAGAGAGAGA GAGAGAGAGC GCGCGCATTC CCCCAATTAA 
    AGCCTCTNTG CTCCAAACCG AGATATACTC TNTACGNTGT NTGTTTNTGC 
    CTTTATCCTT CCCTAGGTGT GTATAATTNT GNTCTTTTCT TATGGAGATG 
    GATCTCAGCN GGGTNACTCT TGACATTTTC ACAAAGCT

AT3G63200.1

Model type
Protein coding
Short Description
PATATIN-like protein 9
Computational Description
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR