1. Home
  2. Mutant Lines
  3. 54-2146-1

54-2146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 450622 [Map]; Strand: w
      • AT3G02270.1 - [+] show detail - Trimeric LpxA-like enzyme
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2146-1 - 5-prime edge 
    GCTACNGGGG CGTGNACCNA ACNANACATC CATTAACAAT GAACATGAGG 
    GCNTTGAATA CNNAGACTCT GCNCTNTGAG TGAGNANCAT GATGCTNNCT 
    GCAGCANCAT ANCCNNNNNN GATTGGGAGA TTTGTGNTGG CGACGTCTAT 
    AGCNTGTTTA CCCGCANCAG TGCTCNTGTG CNGAGTACCA NGTCAGAGTT 
    GTTCAGATAA TCGATGACTT GCATCGAGCA AAAGACGAAA ACTTCTTCTA 
    TGCCAGCAGA TTCGAGCCAA GCTAAGGTGT AATCAATCAT GGGAATATTC 
    ACTAGCGGTA ACAAGACATT GGGGCGTTCT AAGGTTAAGG GAAGGAGTTT 
    CGTGGCGAAA CTGTCAGCGA GAAGAATGGC TTGTAACCGT TGACGGCGAC 
    TCTGTTCCTC CTCTGAATCC TCTGAAATCT TCGCAGCACG TTTCTTACGA 
    GAAGCCATTA TCTGATCTCC CTTCTCTCTC TCTCACTCTC TGAAAATTTT 
    GATCGAAAAT GTCTGCAGGG TGCGAGTACC ATTTCAGACT TGGGAAATTT 
    GAAAAACTCT GTTTTGATTA TTCAAAGACT TTCTCAAAGT CAAAACTTCT 
    TGCAGTGATA ACGTCTTTTT TGNTCCTAAA CGTCACGTGT TTGGCCTTTT 
    GAGAAAACCG GATTTTCTAT NTTGGCCGGC TNCATTTGAG ATTTGGATCA 
    AATTTGTTTT AACAANTAAT AAAAGCCCAA GNTGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 450527 [Map]; Strand: w
      • AT3G02270.1 - [+] show detail - Trimeric LpxA-like enzyme
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2146-1 - 3-prime edge 
    CCTGACGCAG CTGATTCAAG AACACAGAGA TAGAAAAAAG AAAGATGAGA 
    AAGCTATCAT GACTATGGTT ATCAGACAGT CACTCATCAC CGATCATCAA 
    CTCTTCATCG CTGTAAATCC TTTAACAAAA CAGCTTCTTT ATTACGATGA 
    GGACAACATC TGCTTCGATA AATCATTGCT GGATCGTAAT CCATCTGTTT 
    TGTTATGTAG TGATATGCAG GATTGTTACA TTGACATATG TTCTCTTGAG 
    GTGCTTAGTC TATTTGTGGA TAACTTCGAT TACCAACATA TGCGTTGTGA 
    TTTTGTGGAA GGTGTTCTTG CTGATGACAT TATCGGTTAC AAGATTTTCA 
    CTCATGAGAT TAGCTCGTGT TATGCTTCTA GGATTGAAAA TTTCAGGAGC 
    TATGACATGG TGAGCAAGGA TATAATCCAG AGGCGGACAT TCCCGTATGT 
    ACCGGATATG AAGTTCAGCG GAAATCGCAC TCTTAAGCTC GAGAGACAAG 
    GGATCTACAA GGCTTCTGAT GCTACTCAGT TACCATCTGC TCATGTTGGA 
    GCTTCCTATG TCATTGGACA TGCCACAAAT ATTGGGAGTG GGACTAAGAT 
    CTTGAACTCT GTTATTGGGA ATGGATGTTC TATTGGATCA AATGTGGTGA 
    TCCAAGGCTC ATACATATGG AACAATGTTA CCGTTGAAGA TGGATGTGAG 
    ATAAGGANTG CTATNGTATG TGATGANGTG

AT3G02270.1

Model type
Protein coding
Short Description
Trimeric LpxA-like enzyme
Computational Description
Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT2G34970.1); Has 3426 Blast hits to 3381 proteins in 843 species: Archae - 306; Bacteria - 1238; Metazoa - 499; Fungi - 246; Plants - 265; Viruses - 3; Other Eukaryotes - 869 (source: NCBI BLink).
Link
InterPro Scan - TAIR