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54-2235-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6645116 [Map]; Strand: w
      • AT4G10800.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein...
        Distance: 271; Region: intergenic
      • AT4G10810.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 600; Region: intergenic
    Flanking Genome Sequence: 54-2235-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA CACCTCCTTG CACATGTACT TTGTTGAGTA 
    CCCAAAAAGA GATAAATTAT AAAACGCCAT TTATCAGGTT TTATGGAAAC 
    CATCATGCCA AGTTTTTGGA CACAAAACCA CAAATTTCAG GAAGAAAGAT 
    TGAGAAAGGT CATTGGTAAA CTAATATGAC AAAATCATAC ATAAACACAC 
    AACAGTTTCA GAAACTTTTG CTTTCCCCAA CACCTATAGA TGACATCACA 
    TCCCAAAAAT GCAGCTTCAC TAAAACTTGG CACGTATAGA GATAGAGAAA 
    AGGAGGGGAA AAAAACAAGA AGAAAAACCT AATGTAGTCC TCAGAGTCAT 
    TATTGTGCTT CAACATAGCA ACTTCAAATT GCTTTAGCAA TTGGAACGAT 
    GAGTGTAAAA TCTCATTGCA ACTCATCATT GGACTACTAA ACAAAACTCA 
    ATCAATATGA ACCAATCTAC CTACAAAGCA AACCTTGTTA TAAAATTGCA 
    GTCTTTGTAT CCAAAATGAA GCCAGATTAT GTGTTAAACA TCAGTACATC 
    ACCAACAACC ACAAGAGACC AATGATTATG AAAGATACTT CTCTAAAGAT 
    GAATCACACA CAAGATATTC CCAGAATCAC ATTCATCAAC GCAGATGAAT 
    CTTTCAACAA ACTAACTATG TAAAAATCAG AATCACAAAA TCAAGCATAT 
    ATATATAAAT AAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6970125 [Map]; Strand: c
      • AT4G11470.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 31
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 54-2235-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCT 
    ATAGATAGTG CGTCAATCAC TAGAGCCACT CCTCGGTGAG ATGATTGCTT 
    TTGCACTAGT CAGTAGCATT TTACTTGTAA CACAAGCAAC TCCAGTTTTC 
    AAAGGTCCAG TTAATTTTTA TGGTAATATG GGTACATATA AAACCAAACT 
    TATGTGTAGC CGTGTAGGTA GAGTATTCCT TTCTTGTTTT TTCCCATGGC 
    AAGATGAGAA TTTGTCAAAC CTCAAATATG ATACATTAAC CTCTAAGAAC 
    AACCACTTAC GAACCCATTT TTTTACTTCT TCAGTCATCT ATGATAGTCA 
    CCAGCTTGCT TATTCAGCTT TTTGCTCTCC CAGATTTTCT ATAAAGTGGC 
    AACAAATTTT ATTATTTCCC CTGAAATATC CATGCAACTA CACTTATATT 
    ATGATGATGT TCCAATGATT TTGATCACCA ACATTTGTAG ATCTCTAAGG 
    TTTTTATGTT TCATCAAACT CTATCTAGCA GCTTCACATG TGCTAGTATA 
    TTTGTAACGT CTCTCATCCA AGTCCTCTCT TTCAAAGACT GGTTTTCGCT 
    ATTTCAAGAG GCTATAAAGA CTTCCGGAAG CACACTTAAT TAACTGTGAC 
    AGGATGTTTC ACCGAAAAGA TAAGTGGACT TTGGTGACAT AGCTTGCCTC 
    TCCGAAGCAC TATATACACC ACTATATTCC TTTAATAGAG GTGTTACAAT 
    ATCATCTTG

AT4G10800.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10810.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G11470.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31 (CRK31); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 32 (TAIR:AT4G11480.1); Has 120832 Blast hits to 119169 proteins in 4439 species: Archae - 88; Bacteria - 13747; Metazoa - 44536; Fungi - 10306; Plants - 33929; Viruses - 433; Other Eukaryotes - 17793 (source: NCBI BLink).
Link
InterPro Scan - TAIR