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54-2267-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26057152 [Map]; Strand: w
      • AT5G65210.1 - [+] show detail - bZIP transcription factor family protein
        Distance: -471; Region: promoter
      • AT5G65210.6 - [+] show detail - bZIP transcription factor family protein
        Distance: -471; Region: promoter
      • AT5G65210.5 - [+] show detail - bZIP transcription factor family protein
        Distance: -662; Region: promoter
      • AT5G65210.3 - [+] show detail - bZIP transcription factor family protein
        Distance: -666; Region: promoter
    Flanking Genome Sequence: 54-2267-1 - 5-prime edge 
    GAATTCNACC CGANNAAAAT CGGTTTTNCG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC ATGTATGCCG GCGNTTAGTG TTTACATTAN 
    GCGCGTGTAT TTACGCTTGC CGTCGAAACG AATTTTATGT TATCGCCGAC 
    TAATGCGCAG GTTAGAAGCA GACATGCNCA AGATAGAAAA TATAAAATTA 
    TAAGGAAAAG AAATTATAAA TTGGAGAGAA TTTAGAAGAG AATAAAANAA 
    TGGATCTACC TGGTTCGCAC ATCAGCGTGC TAGGTAGTGG AGACATGACA 
    ATTGAATTTT TTAAAAACGA ATAACTAAAT ATTCATAATC AAATTATTAT 
    CTTAAAAAAA ATATTAAGAT TCGATNGGTA TCAGTGGATC ATACATATTA 
    AGTCGCTGCT AATCAAATTT CCTTTTCACT AATTTATTTC CTGCTTTNTT 
    CCTTAGCNCC ATCAANCAAA AAGTTTATGT GAAAAAACGT NTTTTTTCCA 
    CCAAACAGAT ANTTNGTCCG GNGNGTTTNG TCTATAGAAA GCGGAAGAAA 
    AAAATACGNC TANAAAAATG TAATAATGGG TTTTGACTCA CCTGTGACTG 
    AGTCATNCNN TGAANACAAT ANTTCGCCGG NGANACCCAC GGAACNCNNG 
    TAGNAAAAAN TAGGTTCACG CTGTNTTAAA ACAAAANATT ANTAATAACC 
    TGCGNCAANA GGTCNNCATT TTAAAGNNGN GGGGGATTTC TNNTTCCCTT 
    NGTGCTACTT TGAAAATGAA GAAAACCCNG NGTTTCTNAA AACANANG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26057101 [Map]; Strand: w
      • AT5G65210.1 - [+] show detail - bZIP transcription factor family protein
        Distance: -522; Region: promoter
      • AT5G65210.6 - [+] show detail - bZIP transcription factor family protein
        Distance: -522; Region: promoter
      • AT5G65210.5 - [+] show detail - bZIP transcription factor family protein
        Distance: -713; Region: promoter
      • AT5G65210.3 - [+] show detail - bZIP transcription factor family protein
        Distance: -717; Region: promoter
    Flanking Genome Sequence: 54-2267-1 - 3-prime edge 
    TTTCCAAGCG AAGGAATTTA GCGTCTAAAG AGGATAAATA TTGCGCGTGT 
    TTACTACTCG CGGCGTAGCC AAATGGAGTA TTAGAGAACT CCGGAGTCTG 
    CTTCGATTCT GGTGACGTAG TAACGGCTAT TTCTAAATAA ATAATTAAGT 
    AATCTTACTA ATCTAATCTG TAATCAATAT TTCATTTTTT TCTATCTCAT 
    CAACCTGTTT TTAAAACATA TAAATGCAGA GAACCTAAAA AAAAATACTG 
    ATGTTTATCC AAATATCATA GCTGTCTCAT TAAAAAAAAT CAGACTAGTT 
    GACAAAAAAA AGNGTANAAT TTAGTNTAAN AAAACAAAAC TATATATAAT 
    TCTTTTTTTT AACANCTAGC TNTAATATAT TATTACATGC TGATATAATA 
    ATATNGGTTA ANCAAATTAN CGAGTANCGA CCGACCTGAA TGAACAGTTC 
    AAACAANCAA CGTTTATTTA TTCTAAAATT CAATAANATA TNGATCATTT 
    NGTTCATAGC TAACCGGATT NGTNTTAATT AGGGGAATAT AGTTAGTATT 
    TTAGNGTAAA NATGATAACA TTAATTTATN TNGCAAGAAA GGNGGCATAT 
    ATTCTTCTTG GTNATAATAT AAATCGNAGC TNTATAATAC GAGCATAATT 
    TTAAACAAAC TGATTAGTCT TTGGAATTAG TCTAAACAGG CTAATGTTAG 
    TANAGTTNAT TA

AT5G65210.1

Model type
Protein coding
Short Description
bZIP transcription factor family protein
Curator Summary
Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.
Computational Description
TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 731 Blast hits to 729 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 693; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65210.3

Model type
Protein coding
Short Description
bZIP transcription factor family protein
Curator Summary
Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.
Computational Description
TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 731 Blast hits to 729 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 693; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65210.5

Model type
Protein coding
Short Description
bZIP transcription factor family protein
Curator Summary
Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.
Computational Description
TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 731 Blast hits to 729 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 693; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65210.6

Model type
Protein coding
Short Description
bZIP transcription factor family protein
Curator Summary
Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.
Computational Description
TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 674 Blast hits to 672 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 649; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link
InterPro Scan - TAIR