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54-2364-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26470671 [Map]; Strand: w
      • AT5G66260.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -598; Region: promoter
    Flanking Genome Sequence: 54-2364-1 - 5-prime edge 
    GGCTGAGACT CGTCAGCTTC TTTATTTAGG TAGAATTGTA AACAGGTGGT 
    TTTGGTCGGA CCGAAAAACC GGTTAATGAT TGGCAGGCTG CACAGAGACT 
    GTATGGGCAT TCTGTTATAT TTCCGTTAAT GGGGTTTTGT CTGTAATACA 
    TCATTGCTCC AATTTCTTTC ATCCACAGAA CATGAAGAGC CGTCGTCGCC 
    CATGTTCTTC TTTTCAAACC AATTTTNGAA ATCCCCTGGA CATGAATTTT 
    TTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2388797 [Map]; Strand: w
      • AT1G07710.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -811; Region: promoter
    Flanking Genome Sequence: 54-2364-1 - 3-prime edge 
    TNTTACGGGG AACTGNATGC ANTNNNTTAC CCGNACATTA CNTGAGCTNA 
    NNGATNGNCG TTCGANCCCC TCNGANCATA NATTNTGGCT CCTANNNGAN 
    CATGNTTCAN NGAGNACTNA CTCATTGNNG AANANNANNN TNACAACTCG 
    TTGCTNTTGT CTAANATGGN GAGTNCNANC ANNAAANACA NGATAACGNN 
    TTTANGGNAT TNTTCNNTGT NCNGANCANC ACCTTCNCNN GANNGTGGCN 
    CAAANATTTN TGTTTTATAT NCNACTTTCG AATNTCGGCC TGNTGGATNC 
    TCCATNCNCN CNCNNTTGAN GTTNCTGGNC ATNNGCCNCT CNTGTCGTCT 
    TNTTAANCTT TATTAANCTT GTNTCTTCCA CTCTGNNTTC TTTCTTTCTA 
    CTTGTGGAGC TNAACAAGAA ACACCANCTN TTTTTTTTNT TTCNNTANNA 
    NNNNCTCGGT CCCGNCTNAA GGAGGGGCNC CCNNCCNCNN NNNCGNNGGN 
    NATGTAATTT TGANNCCNGG GNNGNNGGNA AANCCNNCAN TTTNCTNTTT 
    TTTNTTCNTT NCCGNNCTAN AAANACCGAA CAAAANCNCN AAAAACCNTT 
    TNNTTTTTCN NCNAATNNCC CAAANACGGG GNGTTNGTNT TTTTNCNCNC 
    CNNCAANAAA ATTTTNGGTN NGNTNNCNCC CCCCCCCCGG GGGGNNGTNN 
    TNACGTTTNC NNCCNNNNGN CNNTTTTNTG NNTNGNCCCC CTCNNCCTCC 
    GTTNTGAGNG GANAGNNGGG GTNTNTTCNN NGANNCCNAG AGCCCNNNNT 
    NGNAAGGGTT TTTTTTTTT

AT1G07710.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66260.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR