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54-2380-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6864089 [Map]; Strand: w
      • AT4G11280.1 - [+] show detail - 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
        Distance: -8; Region: promoter
    Flanking Genome Sequence: 54-2380-1 - 5-prime edge 
    NGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCCCAACACA TCAAACCATA ACTTCCAAAT 
    CTCAACAGAA CCAAAAACAA AAGAAACCTA TATTAAAGAA GAAACAAAAA 
    ATGGTGGCTT TTGCAACAGA GAAGAAGCAA GATCTGAATC TATTGTCTAA 
    AATCGCCTCC GGTGACGGTC ACGGCGAGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6864091 [Map]; Strand: w
      • AT4G11280.1 - [+] show detail - 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
        Distance: -6; Region: promoter
    Flanking Genome Sequence: 54-2380-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CTCTCAAGTG AGATTGTGTT CTATATATAG AGGTTTGGTT TCAGGTGTAC 
    ACACCGAGTA TGTGGAGCGT TGTAGATAGA TTACAACGAA AGTTCCATGA 
    AAGAACTGAA GAAAGTAGAA ATTTCAAAAT GGTCCTTATT GTTTGTTATA 
    GTTTTGTTTG ACTTCCCTAA AGTTTGAATT GTTTTTGTGT CTTTTGGAGT 
    GGATTTGAAC CAAATTTGTG AAAAAGAGTG ATCATTGTGG GGGACCTGAG 
    AGTACATAAC ATTAAGTCCA ATTTCAGTAT TTGGAAAAGA AATGAGACAT 
    CAATTTGAAT TTTACAAGAT CAGAATCTGT TAAAATTTGT ATTTGATGGA 
    AAATAATGGA CCGGAATT

AT4G11280.1

Model type
Protein coding
Short Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
Curator Summary
encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family
Computational Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR