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54-2383-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26460655 [Map]; Strand: c
      • AT5G66211.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -825; Region: promoter
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -497; Region: promoter
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -522; Region: promoter
    Flanking Genome Sequence: 54-2383-1 - 3-prime edge 
    CTCACCAATT ATGATCACTA GTGAGCCCAA CCAACCGGGC CCAATACGCT 
    TTCATCTTTT GGGCCCAATC ATTTTTTTCC TCAAACTTCA AAATTTTCAT 
    TACAGCATAT CGCTGGTGTG TGCACGGCAT GCATGAGAAG CTAAAACGAA 
    TGGTGGATAT AACTAACATA TACAGCTTAT ACTATACATG GTATACAAAC 
    AAAAATGATG ATCCAAGCTA ACCTACTCAC TCATAGTTGT CCATTTATTC 
    TTTCTCAAAA CAAAATCCCA TACACCAGAC CTCTAAGTTC TAAGTCTACG 
    ACTACGAGCA TAGTCACAAT GTCTCTCGCC AACAGTCTCT TATCATCAAG 
    TAAGTTTCAT TATTTTCTCC CCAATATCAC TTTGTCGCAT GCATTTCCAT 
    CCAGTACTAT TAATTGAATC TCTTTTTTTT TGGTTGAAAA TATTCATTTC 
    CCCATCCAAT CTCCTTTAAA AATTAAAAAA AAATTGGATT TATTTCTTTC 
    AGTAAAAATG AAAAAGTTGT AAATTATAGT CTTCATTAAT CTTCATGGAC 
    CTTAATTATA AATAAATGTC AAAAAAATGA AACTAGACTT GAGTTGGTCT 
    TCCTCGTCGC CCATGCCGNT GCCTTCCGTG ACGCCACTCC ACGTCGACGC 
    ATTTACTTTT NCTCCGGGTG GTTGAGTCGC CCCGCTTCCC ACAAAANACT 
    TTTCCTTGGG GGNGCANGGT ANCAT

AT5G66211.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66220.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR