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54-2392-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 129701 [Map]; Strand: c
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: -445; Region: promoter
    Flanking Genome Sequence: 54-2392-1 - 5-prime edge 
    CNTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATTGT CATGAGAACA TGCCAACAAT AGTTATTGTT 
    TGTTTAATTA AATAATGGTT ATTGTTTGTT TAATTAAGAG TTAAGACTAA 
    AAAGCATGCC AACAAAAAAA AAAGTNGANA AAAAATCCNA TCAAAGGGGG 
    ATTNNTTTNA ATTATNTAAT CCCNATGGAA NATGGNCTAN GGNNATNANN 
    TNGCAGGNCT CCTTTAAAAA TTANGGANTT TTCACACCNC ATCCACGNAN 
    GNTTNTNGGG GATCAANTNC TTGGCNAAGG NNCNGGTTCA NNCNGTTNTN 
    AANCTCAACN NCCCTTTTGA NTTNGAANGN NNGCCCATTT TTTTTTTTTT 
    TTNNATTTGA ATNACNNNCC NNCCTTTTTT NTNAAGNAAA ANAAAAACTN 
    TTNGGGGGGG GGGNCCCCCC GCCCNTTAAA AAANAAAAAG NAAAAANCGN 
    NCCNNNCNCN NNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 129701 [Map]; Strand: c
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: -445; Region: promoter
    Flanking Genome Sequence: 54-2392-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    TCATGAGAGA TGATGATACG TGTTCTCTTT ATTCATGCCA CAAATTCATT 
    TATATAAATA TAATCTACTA TTCACTATTA ATCTATTATT AATACGATTT 
    GATTTATTTA ACATTTGCAT GCAGAAATAT GATAACATTT GTTGATATTT 
    AGCTATATCC GGTCATATAT AGTTTGTAAA TAGAAATATA TTATTTGTTT 
    TCATTTTATT TGTTTCCATT TTAATTTATT TTATACTCTC TATATATTTT 
    CAAATAGGTG TATATAAAAT TTAAAATTAT ATGACTATAA AATATAACCT 
    TTGTGAGAAA AAAAAAATAT AACTTTCTAG TTNCCTAATN AAATATTNAT 
    TNGNCTATTT NGCAAACAAN ATTTTCTTTC TNATTACTTC TATCCAGCTC 
    TTNATTTNGT TNCATTTNGT TNATATAAGG TTTNGCTTAG GGATGGGCTT 
    ACGGTTTTTC GGTTGGGTTN CNATTCAAAA TTTTNGGTTT TNCNATTTTT 
    TAGTTTTATT AAAACTATAA CTATNTANAA ACCATACATA ATTCGTTTGG 
    GTTACGGNNC GATTTTTATA GTTTNATGGT TTTTCGAATT TATAAATNTT 
    GAAACCATNC AAAAACCNTN TTTTTCTCGG CTTGGTTCCG GTTTGACCAC 
    AATTTATTTG GTTATTCCAT ATTTTNACNA AAAATANGNN GNNAAATATA 
    ANANNNTCNT TTTATAANNA AA

AT2G01240.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR