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54-2408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13141861 [Map]; Strand: w
      • AT4G25845.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-r...
        Distance: -227; Region: promoter
      • AT4G25850.2 - [+] show detail - OSBP(oxysterol binding protein)-related protein 4B
        Distance: -303; Region: promoter
    Flanking Genome Sequence: 54-2408-1 - 3-prime edge 
    GNNAAGAAAA NNNNGGAAAN NGNNNNNNNN GNGAGNANAN AAAAAAAAAA 
    AAAATAAAAA ANNGGNNCTC NTTANGGGAA CCNGAGGTGA NTTNTTTCGA 
    CCGNTACNNA CCGTTTTCAA CCCTACTGCN GANCNTAAAG ATGTNNATAA 
    CGTNCTCTCT ACNCAGTCAG GATTAATCAT GGATNGGCTC ATNTGTATCN 
    GAAAATTGAT GGGNGTACNG ATGTCTTTAC TCAAAACGGC NCGAANTGAA 
    ACATATAGNN TGCAAGATAA NAAATNAAAG TNNGCCAAAT ATATNNAAAC 
    TTTGNTCCGA ANCACACGNN ATNAACGNCG ANGGNGGACA AGCCCCTAAG 
    TNCATGTGAN NTGCNTAGAC CCCATNNCNA TANCNAGTAA NNCACTCCCN 
    ACGCCTNCGC NCGNCNNANC TNNCCANNAA AGANACNNNN CNNNNNAGCN 
    NNCGGNGCNC AACAAANCNN GCGCGGGGNG NNCNGNGAGC TCGCNCCNGA 
    NAAGNCCNAA NGNNTGGCGG ACGCCNANCN GGACCGCCAA NGNNGNNGGA 
    AAGANCAAGA AGGGGGCGGC NNGNGNCCAA NANCCNNNNN GNANCCAGNC 
    ACCNATCNGG NCGGCACCCG NNGGGGANAG CGNAGGAGGG GGGGGNNGCA 
    AAGNCCNNNN AANGCGGCGC GGGCACGGGG GTTGGCCAAG CAGAANAGNN 
    AAGNNANAAA NAANGNCCCC NNNGNGCGCC CGAGGNGTNC CGAGAATNNA 
    GGGAGNCGNA AGGAAACACC ACNACGNGCN CANNNACACT AANANGNANN 
    CANNCCGCCN GGTCNCNNCN NAANANCACA CAGTACAAAA GACNAAAACC 
    NGNACGGNCN CNGATCGAAC CCCCNACNAN GTCGCAAGCG GGNAAANNGA 
    TACNNNGNNT NTGGCGGCGC NAAAAAAACA ANCAAAANAN AANAAATAAC 
    AAAAAA

AT4G25845.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25850.2

Model type
Protein coding
Short Description
OSBP(oxysterol binding protein)-related protein 4B
Computational Description
OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1).
Link
InterPro Scan - TAIR