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54-2408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13141861 [Map]; Strand: w
      • AT4G25845.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-r...
        Distance: -227; Region: promoter
      • AT4G25850.2 - [+] show detail - OSBP(oxysterol binding protein)-related protein 4B
        Distance: -303; Region: promoter
    Flanking Genome Sequence: 54-2408-1 - 3-prime edge
    GNNAAGAAAA NNNNGGAAAN NGNNNNNNNN GNGAGNANAN AAAAAAAAAA 
    AAAATAAAAA ANNGGNNCTC NTTANGGGAA CCNGAGGTGA NTTNTTTCGA
    CCGNTACNNA CCGTTTTCAA CCCTACTGCN GANCNTAAAG ATGTNNATAA
    CGTNCTCTCT ACNCAGTCAG GATTAATCAT GGATNGGCTC ATNTGTATCN
    GAAAATTGAT GGGNGTACNG ATGTCTTTAC TCAAAACGGC NCGAANTGAA
    ACATATAGNN TGCAAGATAA NAAATNAAAG TNNGCCAAAT ATATNNAAAC
    TTTGNTCCGA ANCACACGNN ATNAACGNCG ANGGNGGACA AGCCCCTAAG
    TNCATGTGAN NTGCNTAGAC CCCATNNCNA TANCNAGTAA NNCACTCCCN
    ACGCCTNCGC NCGNCNNANC TNNCCANNAA AGANACNNNN CNNNNNAGCN
    NNCGGNGCNC AACAAANCNN GCGCGGGGNG NNCNGNGAGC TCGCNCCNGA
    NAAGNCCNAA NGNNTGGCGG ACGCCNANCN GGACCGCCAA NGNNGNNGGA
    AAGANCAAGA AGGGGGCGGC NNGNGNCCAA NANCCNNNNN GNANCCAGNC
    ACCNATCNGG NCGGCACCCG NNGGGGANAG CGNAGGAGGG GGGGGNNGCA
    AAGNCCNNNN AANGCGGCGC GGGCACGGGG GTTGGCCAAG CAGAANAGNN
    AAGNNANAAA NAANGNCCCC NNNGNGCGCC CGAGGNGTNC CGAGAATNNA
    GGGAGNCGNA AGGAAACACC ACNACGNGCN CANNNACACT AANANGNANN
    CANNCCGCCN GGTCNCNNCN NAANANCACA CAGTACAAAA GACNAAAACC
    NGNACGGNCN CNGATCGAAC CCCCNACNAN GTCGCAAGCG GGNAAANNGA
    TACNNNGNNT NTGGCGGCGC NAAAAAAACA ANCAAAANAN AANAAATAAC
    AAAAAA

AT4G25845.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25850.2

Model type
Protein coding
Short Description
OSBP(oxysterol binding protein)-related protein 4B
Computational Description
OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1).
Link
InterPro Scan - TAIR