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54-2410-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13141787 [Map]; Strand: w
      • AT4G25845.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-r...
        Distance: -301; Region: promoter
      • AT4G25850.2 - [+] show detail - OSBP(oxysterol binding protein)-related protein 4B
        Distance: -377; Region: promoter
    Flanking Genome Sequence: 54-2410-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCTAATAT 
    ACTGTTGATC TTAAAGATGT TTATAACGTT CTCTCTAATC AATCAGATTA 
    ATTATGGATT GGCTCATATA TATCTGAAAA TTGATGGGTG TACGATTCTT 
    TACTCAAAAC GGCAAAAATG AAACATATAG TTTTCAAGAT AATAAATTAA 
    AGTTTGCCAA ATATATGTAA ACTTTGATAC GAATCACACG TTATTAACGT 
    TGATGTTGGA CGGTTCATAA GTGCATGTGA ATGCTTAGAC CCTATCTCTA 
    TATAGAGTAA AGACTCGCCA AACTTTGCGT CCTCTTTAAT CATCAAATTT 
    ATCTTTTTCA CAATCCCTTG TACTAAACCA AACAAATCTA TTACTAAAAT 
    AGATCTAAAT TTTCATTAAC GATGATTTAT AAATCATTGA TAGTAAATAG 
    TAACGACAAA CGAGTGGGAA AAAATCATCA TTACGAAAGT AAGCAATGAA 
    TAACACTTCT TTGAAAACGA TGCAACATTG CTACATAAAG ACATACTTTG 
    TATTAGTGCT AACTTGGATT CAGATTATGT GAGTAAGTTA ATTGCGGACG 
    ACACAAATAA AATAAAAAAG TGAGACAATA TTTTCGCCCG TTGCAATCAT 
    TGAAGTTTCT TACAAGAGAT AAGTTGCAAT TTGGTTTGGT AGAGAATAGA 
    GATATGTGAT TGGTTTTGAT TTTAACATTC AATGTCATGT ACCAATCATG 
    TCGGGTTTCT ACAATAATCG TAGCAA

AT4G25845.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25850.2

Model type
Protein coding
Short Description
OSBP(oxysterol binding protein)-related protein 4B
Computational Description
OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1).
Link
InterPro Scan - TAIR