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54-2413-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23151007 [Map]; Strand: w
      • AT5G57140.1 - [+] show detail - purple acid phosphatase 28
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-2413-2 - 5-prime edge 
    TGAAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCCCTT ACACGCCCTT TATCGGTCAG TTTCAGGAAG 
    GAGTGGCATG CTCTATTGTT CAGTCTGGAG TCTTACAGAC ATTTGTGTCA 
    ATGGGAAATG TAAAAGCTGC GTTCATGGGA CACNGACCAT GTTAATGATT 
    TCTGTGGAAC TCTAAAAGGG GTATGGTTTT GTTACGGTGG AGGATTCGGA 
    TACCATGCTT ATGGACGACC AAATTGGCAT AGAAGAGCAA GAGTGATAGA 
    AGCTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23151000 [Map]; Strand: w
      • AT5G57140.1 - [+] show detail - purple acid phosphatase 28
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-2413-2 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACAGTTCCCG AACTTCCAAT ATTGGGATGT GGAAGAAGGC TAACGCTGGC 
    GGATTAACAT GAATCCTCTG GCTATGACCC TGTTTAGTCA CTAGTCANTG 
    AGTCTACTTA GAGGTAATGA ATCTATGTGA GGTTTCCACT AAATATATTG 
    ACAGATGCGT TAACCTCATT ACCTGTATAG AAGTATCTTG AAGCCAACGA 
    AGTTGTGATG TCCTTGATCC ATCCATAAGT TCGTTTACCT TGTACTATTT 
    CTCTATCTCC ACTATCAAGA AAGAAGAGAT CAAAGACGGT ACTATTCGCC 
    AACACAGAAC CAGGAGCACC GTAAACTCTC ACCCGGTAAT TCCCAAATCC 
    ATCGATTAAC CTCATTGTAT CTCCTTTAGT TTCATCTTCA ACAAGTGGAT 
    TGATTTGAGA AACAGAAAAA TCCATAAGAG AAAGGAAAGT CATCAATTCT 
    AAACGGCTCA AAGTAGATTC ATGGNCATGA TTTCCTAAAA CAGCAGCCCA 
    TGGGATTCCA TATTCAATAG CTGGACCAAT AGCTTCAAGA AGAGATTCAN 
    CTGCATCAGT AGTACTTGAT CCAAATATAT TATCCCCTAA TTCATCATCA 
    ACANACAGAA TCAATTTANT CTTTNAACCT TCTCTGANCA TATCAATTAG 
    TTNATGAATT TTTACCAGTG AAAGCAATCA AATCANGTCT CTCAGATTCA 
    ATCATCCTAC GAAGAAACCG AGTAGT

AT5G57140.1

Model type
Protein coding
Short Description
purple acid phosphatase 28
Computational Description
purple acid phosphatase 28 (PAP28); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 29 (TAIR:AT5G63140.1); Has 678 Blast hits to 661 proteins in 227 species: Archae - 0; Bacteria - 324; Metazoa - 0; Fungi - 205; Plants - 115; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR