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54-2444-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30391176 [Map]; Strand: w
      • AT1G80870.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -957; Region: promoter
    Flanking Genome Sequence: 54-2444-1 - 5-prime edge 
    ACAGTACCCA CTAATGACTT TATCGATCAC AAACATAAAG AATGGGACAT 
    CCCGTAGAGT TTTTGTTTTC TTACGAACTT GACATTACAT TTGTCGTAAT 
    AATACCAGAA TCGTTATGGA TCTTTCTATA CCATAATACT CACAAGTTTT 
    TGTCGATCGA ATTTGAACCA AAATATCCAT TTGCAATCTT TTGAGATTCG 
    TGTACGTTTT GCCAAACAGC TAGCTATAGT GTCCTTTTCA AACTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30391060 [Map]; Strand: w
      • AT1G80865.1 - [+] show detail - unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bac...
        Distance: 503; Region: intergenic
      • AT1G80870.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -1073; Region: intergenic
    Flanking Genome Sequence: 54-2444-1 - 3-prime edge 
    GGTACTGTAT GTGGACCAAC AATGTCATGT GCACTCAGAT TTCTGAAATA 
    TTTCGTTATT CAAAAATCAA AATAAAGAGA GTGAGTCAGA GTAAAAGAAT 
    CTCCACTGTC TTTTGTTGTG TTGCCCTTAC AGAGTTTTGG TGTTTGATTT 
    GAACCATTAA TTATTATCAT CAATAGTCTA TCAACAACAA CAACAACAAC 
    AACAAAACTC TTACATAGTC TAAAATGCTT TCCATAGAAT TTATACTACA 
    ATCTATTTCA TGGATTATCA AAGCT

AT1G80865.1

Model type
Protein coding
Computational Description
unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80870.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G51770.1); Has 92712 Blast hits to 76168 proteins in 3269 species: Archae - 56; Bacteria - 7291; Metazoa - 26312; Fungi - 5337; Plants - 43631; Viruses - 173; Other Eukaryotes - 9912 (source: NCBI BLink).
Link
InterPro Scan - TAIR