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Mutant Lines
54-2455-1

54-2455-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 27420051 [Map]; Strand: c
- AT1G72860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon2 (CDS)
- AT1G72870.1 - [+] show detail - Disease resistance protein (TIR-NBS class)
  Distance: -972; Region: promoter

CATGGAGCGA CTGAGTCCTC TATTGAGTAT GGACTCTGAG AGTGAGGTTC 
GTATGATAGG AATCTGGGGA ATGGGAGGTA TCGGCAAAAC CACCATTGCC 
AAGTGTCTCT TTGACCAGTT ATCACAGGGA TTCTCAGCTC GTTGTTTCCT 
TCAAAATGTT TCCAAGATTT ATAGAAAGGG TGGTGTCTCG TATTTAACAG 
AAAAGTTTCT TTCAACCACA CTTGGTCTCT CTAAGAAGAA GATGAAGGGT 
TCGGGCGTAA AACTTGGACC CCAGGAGATT AAGGCGAGGT TTGGATGTCG 
TAAAGTCTTT GTTGTCCTTG ATAATGTGGA TGACATGAGA CAAATGCATG 
CTTTTGCTCA AGAGTCGAGC TGGTTTGGGC CAGGCAGTCG AATAATCATA 
ACAACACGAG ACAAGGGCTT GCTCAATACA TACGGAGTAA GAACTGTATA 
TGAAGTTAAG TGCATGGATA ATGATGCTGC TCTTCAGTTA TTTAACCAGT 
TGGCTTTCAA AGGAGCGCTT CCTCCTTCTG AACTTTATGA AAAACTGTCA 
ATCCGAGCGT CTTGGCTTGC TCAAGGTCTT CCAGTCGCTA TTGAAGCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 27420167 [Map]; Strand: c
- AT1G72860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon2 (CDS)
- AT1G72870.1 - [+] show detail - Disease resistance protein (TIR-NBS class)
  Distance: -856; Region: promoter

GCTCCATGTG AGCGTCCATC CCTACGATGT CGCTGAAATC TACCGGCTGC 
ATAATTAACA ACTTGTTGGA AATGTCTTTA ACAATCTCTT CAATCATGGA 
GGCCTCGTCT TCACTAGAAT ATGGAAAATT CTAAGAATTA TTATTATCAG 
TTCCATAGAT ATATGATACA CTTGAAATTA AACCATATGT TGGTGGTGAA 
AACTTACCAA GTTGCAAAAT CCTTGCCTGC TAAACTGGCG ATCTGGGAGA 
GAGCTTCTCT CCAAGTTGTG ACCTTGTTAG CCTTTTCTGA GTCTTGGTAC 
TTGTCCAATG TGAAACTACC AGTCTGATAT CTCACGTGAG AAGGATCAAC 
TCCATAGAAA ATGGGGACGG CTTTAATCTT ATTCTTCAGG TGAAGATCCA 
TTACCATACG GAGCTCGTCC AGGCACCAAC TAGATGAAGT GTAGTTCTCC 
GATAGAATAA CAAGAGCAAA TGAAGATTCT TGGATGGCTC TGCTGATCTC 
TTCGGAAATG GAGTCGCCGA GCTCAAGCCT TAAATTATCT TTGAACGTAA 
CAACTCCGCT TTTGACAAGT TCTTTGTGCA AATGGCTGAC GATGTTCTTG 
CGGGTGTCTT CTCCCCGGAA ACTTAGGAAC ACATCATACT TCCAGGTAGG 
GGGTTGATGA GGACGAAGAA GCCATCGGTC AACTATGCGC CAAATTAAAG 
AAGGAGGAGG AAGAAAAAAA GGTT

AT1G72860.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, leaf; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G17600.1); Has 17128 Blast hits to 12682 proteins in 562 species: Archae - 4; Bacteria - 839; Metazoa - 1175; Fungi - 47; Plants - 14820; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72870.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS class)
Computational Description: Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sperm cell, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS class) (TAIR:AT5G48780.2); Has 7950 Blast hits to 7386 proteins in 227 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7937; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR