Home
Mutant Lines
54-2496-2

54-2496-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26463965 [Map]; Strand: w
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon3 (3UTR)

CTTGGAGTTG TGACAAAAAG CCTCATATGT CTCGACTTTT TTTTTTTTTT 
TTTTTNGGGG GGGGGGNAAA AANNAAAAAN TNGNTTTTNG NTNNANCCCN 
GGGGNTTTTT TTAAAAANCA AAANGGGGAA NGGGNAAANN NCCTTTTTNN 
TTTTNNNTTT NNTTNGGNGG GGGGNAAAAA NGGGNTTAAA TNGGGGNNNN 
NCCCAACCCC NNAAAAAAAA AACCNGGNCN NNNCCCNNNN AAAAAANAAA 
NNTTNGNTTN AAAANAAAAA AAANNNGGNA AAAGGGGGNT TTTTTGGGGN 
CCCCCCCCCC CCCCNNNAAA AAAAAAAAAA ANNNGGGGGG NNNTNGGGGG 
NAAAAAAAAA ANCCCCGGGN CNGGGGNAAT NGNNCCCNNN AAAAANAANT 
TTTNGNAAAA AAANTNGNNT NCCNNGGNNG GNTTTTTNAA AAAAANCCGG 
GGNNAAAAAA AAAAAANNNN TTTTTTTTTN NAANCCCCCN AAATTNGNTT 
TTTTTGGGGG GGNAAANNNC CCTTNNNCNN TTNGNCCCNN TTTTAAANTT 
GGGGTTNGNC CGGGGNNGCN NCCNAAANNN TTTANNNGGG GGNGNNANGG 
NTNAAAANNG GGTTNNTGGG GTTTNNNNNN NGCCCCCCNA AAAGNNNNGG 
NNAANTTTTT GGGGGAAAAA ANNNCCGGGG NNGGGANCCC GGGGNGTTTT 
TTTTN

3 prime edge [+] show sequence

Chromosome: 5; Position: 26463849 [Map]; Strand: w
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon7 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon3 (CDS)

ACTCCAAGAA GAAAGATTCA AACTGAACTC ATTCATCACC GGCAAATCTG 
ACATGTTTTC CTGTCGGTGT AGGAAAGCCT TTCAAACGCA ACACTCCTGG 
AGATTGATCT TTGGCCTCCA CAATCTCTTC ATCTTCACTG TCATACACAA 
ATCTAGTGTG TTTCCCTGCA AAGTCAGTCT CTACGCTCAT CTTCCTAATT 
CCCTCACACA ACCCATCCAC AATCCCTCCC TCTTCTTCCT CCTCTTCCTC 
GTCGTAGTAT TCCTCATCAT ATTCCTCACC GTAAGAATAG GCTTCTTCCT 
CTTCATCATC ATACTCTTCG TCTTTGGCAC TTGCATTGGC CTGCATCGAC 
CACACCGACG AGTTATCATC CTCTGGGTTT TGAGTCACCA CAGATGAGCA 
GTCTGAGCTC TCCCATAATT CTGATTTATC ACTAAAGTCC AGAAGCAATG 
ACCGAGTAAT GCTCGGGCTC TTCTCTAACT CCAAGCT

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR