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54-2568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682463 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 72; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2603; Region: intergenic
    Flanking Genome Sequence: 54-2568-1 - 5-prime edge
    TTCTTACCCG AGACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ATAATCTTAG GTTCATCAGT TTCAAATTTG
    TTGCTACCAA TTCAAAGAGC TTCTTCTTAT GGTTGCATAC CTTGAGAAGA
    GAAACTGAAT GTTGTGAGTA AAGTTTCTTC TTAAGGTATT TTGTAGTTTC
    CAGGTCTGCA AGTGAGTAAA GCTCCTGGTT AAATCCATGT ATGAGCTGCA
    TCTCCCCACT TGAGCTCTTC TAAAGCTACC CTCAGCGAAT GGAGTTGAAA
    TTGTGTTTAG ATGCAACAGG CTCCAATTTA GCTATAATCT GCTCAACAGC
    GTCTAAAACT GCAGCACCAT ACATATCAGA GCTCGCAGAA GCAGCAGTAG
    GTGACGCGTT AGGAACCTAT TAAGAGGCAA TCAAAACGAC AAGAGAGCAA
    TAACAGTGTG TGAGGCATTT GGAACCTATT AAGAGACCAC AAAAGATAAG
    AGAGAACAAT ATCAGTTTTG TCTTGGCCAA AAAGTCCACT GAGTGCATGT
    AACCGAGTTA GATGTACCTT GTATGTGCTT GATTCTGACA CAAAAACTGA
    CTAAGGGGAA TGACACAACC TTTTTATGCA AATCCTTGAC CCATTTTCAA
    CACCTGCATG TGTCACCCAA AACAGTNCCA TTGGTGCAAA CATGANCAAA
    AGCACCGGCC TGGAATAATA ATANGTGTTG GGAGTAAGGT ATNTTATAAT
    CCANATTNCT AGATTTTGCA AGCAAANGGA N
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682451 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 60; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2615; Region: intergenic
    Flanking Genome Sequence: 54-2568-1 - 3-prime edge
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGA 
    AACTCATTTT GCTAGTTTAA AGTTTTCAAC TTTTCACCAA AGGTAATGAA
    GTATTTAACT ACATAAATCA AACCCAGTAG TATACTAAAA GACATTAGAC
    AAATGAGAGA GACAGCTTCG ATTTTCAGAC AGCTTTAGGT TGGATTTGTT
    CGAAGTCGAA AACCTCAAAC ATGAGCCGCC GAACATCGGG TTTCCCGTAG
    ATGGTGTAGG CGAGGCCGTG AATGGCTTGT TGAACAGCGG TTGTCGCCGG
    ATTCCTAAGT CTCCGGTTAT GTTCATACCG ATCATGAACC TCCTCTGAGT
    ATATTATAAA GTTGTGAAGA CGTTTTTCTC TAAGATACCG GCCGCAGAAT
    TTGTTCATTA ATAGACATCT ATGCTTCTCT TGCAACCACT TCCCTGGTGC
    GTCCAAAACG TTCAGCCATT GCTATGTCCT GCATGATCCC AAGACGAAAA
    ATCGGGTTAA AAAAAAGAAA GAAAGAAAAG AACCGTTCTT TTGATCTTTT
    AAGATGAGAG ATCGTTATCC TCACCTGTAT CTTCTGTCCT ACATATTCCA
    GCCGCTCAAA ACAAAACCGC GGGTGTTCAA ACTTATGCTT TGAAGGATGC
    AAGAAGCAGA GCTGTCACTT AAAATCTCAT AGTATTGAGG CCCATTAGTG
    GCTCAACATG GCCCATTTAT ACNGGTTTTT TTGATCTGAG ATCCAGAA

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR