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54-2568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682463 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 72; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2603; Region: intergenic
    Flanking Genome Sequence: 54-2568-1 - 5-prime edge 
    TTCTTACCCG AGACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ATAATCTTAG GTTCATCAGT TTCAAATTTG 
    TTGCTACCAA TTCAAAGAGC TTCTTCTTAT GGTTGCATAC CTTGAGAAGA 
    GAAACTGAAT GTTGTGAGTA AAGTTTCTTC TTAAGGTATT TTGTAGTTTC 
    CAGGTCTGCA AGTGAGTAAA GCTCCTGGTT AAATCCATGT ATGAGCTGCA 
    TCTCCCCACT TGAGCTCTTC TAAAGCTACC CTCAGCGAAT GGAGTTGAAA 
    TTGTGTTTAG ATGCAACAGG CTCCAATTTA GCTATAATCT GCTCAACAGC 
    GTCTAAAACT GCAGCACCAT ACATATCAGA GCTCGCAGAA GCAGCAGTAG 
    GTGACGCGTT AGGAACCTAT TAAGAGGCAA TCAAAACGAC AAGAGAGCAA 
    TAACAGTGTG TGAGGCATTT GGAACCTATT AAGAGACCAC AAAAGATAAG 
    AGAGAACAAT ATCAGTTTTG TCTTGGCCAA AAAGTCCACT GAGTGCATGT 
    AACCGAGTTA GATGTACCTT GTATGTGCTT GATTCTGACA CAAAAACTGA 
    CTAAGGGGAA TGACACAACC TTTTTATGCA AATCCTTGAC CCATTTTCAA 
    CACCTGCATG TGTCACCCAA AACAGTNCCA TTGGTGCAAA CATGANCAAA 
    AGCACCGGCC TGGAATAATA ATANGTGTTG GGAGTAAGGT ATNTTATAAT 
    CCANATTNCT AGATTTTGCA AGCAAANGGA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682451 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 60; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2615; Region: intergenic
    Flanking Genome Sequence: 54-2568-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGA 
    AACTCATTTT GCTAGTTTAA AGTTTTCAAC TTTTCACCAA AGGTAATGAA 
    GTATTTAACT ACATAAATCA AACCCAGTAG TATACTAAAA GACATTAGAC 
    AAATGAGAGA GACAGCTTCG ATTTTCAGAC AGCTTTAGGT TGGATTTGTT 
    CGAAGTCGAA AACCTCAAAC ATGAGCCGCC GAACATCGGG TTTCCCGTAG 
    ATGGTGTAGG CGAGGCCGTG AATGGCTTGT TGAACAGCGG TTGTCGCCGG 
    ATTCCTAAGT CTCCGGTTAT GTTCATACCG ATCATGAACC TCCTCTGAGT 
    ATATTATAAA GTTGTGAAGA CGTTTTTCTC TAAGATACCG GCCGCAGAAT 
    TTGTTCATTA ATAGACATCT ATGCTTCTCT TGCAACCACT TCCCTGGTGC 
    GTCCAAAACG TTCAGCCATT GCTATGTCCT GCATGATCCC AAGACGAAAA 
    ATCGGGTTAA AAAAAAGAAA GAAAGAAAAG AACCGTTCTT TTGATCTTTT 
    AAGATGAGAG ATCGTTATCC TCACCTGTAT CTTCTGTCCT ACATATTCCA 
    GCCGCTCAAA ACAAAACCGC GGGTGTTCAA ACTTATGCTT TGAAGGATGC 
    AAGAAGCAGA GCTGTCACTT AAAATCTCAT AGTATTGAGG CCCATTAGTG 
    GCTCAACATG GCCCATTTAT ACNGGTTTTT TTGATCTGAG ATCCAGAA

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR