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54-2571-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29714487 [Map]; Strand: c
      • AT1G78990.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2571-1 - 5-prime edge 
    GCGATACAGG TAACAGTTTC AACGATAGTT CACTACAACA ACATATATAT 
    AACTAGGTTT TTGTTTAATT TTGTGAACAG GTGACTCAAC TGAAATGTGG 
    GAGCATAGTT GTAGGCTGCA CATTTGATCA TCGTGTAGCG GACGCGTATT 
    CCATGAACAT GTTCCTCTTA TCGTGGGCCG AGATCTCACG ATCAGATGTA 
    CCAATCTCTT GTGTACCATC TTTTCGAAGA TCTTTGCTAA ACCCACGACG 
    ACCATTGGTC ATGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29714559 [Map]; Strand: c
      • AT1G78990.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2571-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GCTATGACTC CATGTTTCTT GATGGGGACT AGCTTGGCAA TACTTTCATC 
    AGGATCATAC AGGTTAAGCT CTCGGAGCTC CACGTCAGCA CCGGCTTCCA 
    CGAAATCTAC GCCACGGTTG TTGCAGAGGA TCTCCGGTTC TCCGGTAGGA 
    TTGGTGACGA GCTCGCCGGC AAAGGCGTAG TAGGAGACGA GAGTCTCTGC 
    CAAAGCAGTC TTGAGGGTTT CATAAGCCAC TGTGTTGGTA AAGTGAAGTG 
    GTTTCTTGTA GCAAAAGCAA ACGTGAACGT TGAGAGGAGG AAGGAGGAGG 
    TCGAGGTTCG AGAGTGGGAG CCAGTGGTCC TGGAGGGGAA GAGCCGCCGT 
    GATGACTTGC TTCCTGGTGG TGGTCACGTG GAAGCCACGT GCTTGCTCCG 
    CCGCTTCTCC CATTTGGTTG TTGTTTTCGG AGAGAATGAA GAATGTTGTG 
    TGGTGTGGGT TGTTGGAAGA TGCTGTCTAG AAGAGAATTT ATAACAGAGC 
    TTAGGAGTGA ATTAGGTGAA ACTTTCCAAC ATTTCGCTGA TTTATTAATT 
    TGAGGAAACA GAACAAGCTG GTTTACGATA ATGCGTACGG NCCATTAGTT 
    TTCCGTTGGG CCATATTACC ACCCATTGGG CCTTGATTTT TCAACGAGAT 
    AATTAGAAAT AACTGTAAGC CAACAACGTG TTTTGCCGCA TGTNACGAAG 
    AAACAA

AT1G78990.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G32910.1); Has 2253 Blast hits to 2240 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 21; Plants - 2228; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR